RNA–Protein interactions for RNA: ENST00000521047.1

CLINT1-203, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-203ENST00000521047 WWC1Q8IX03 1113 aa10.21□□□□□ -0.77
CLINT1-203ENST00000521047 LTBP3Q9NS15 1303 aa10.21□□□□□ -0.78
CLINT1-203ENST00000521047 LRRC37AA6NMS7 1700 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 NPR1P16066 1061 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 HOXA10P31260 410 aaPredicted RBP10.2□□□□□ -0.78
CLINT1-203ENST00000521047 SLC10A5Q5PT55 438 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 HDGFL1Q5TGJ6 251 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 NPM2Q86SE8 214 aaKnown RBP10.2□□□□□ -0.78
CLINT1-203ENST00000521047 NLRP10Q86W26 655 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
CLINT1-203ENST00000521047 LTBP1Q14766 1721 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 DUOX1Q9NRD9 1551 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 LMNB1P20700 586 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 HNRNPUQ00839 825 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLINT1-203ENST00000521047 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
CLINT1-203ENST00000521047 TCIRG1Q13488 830 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 TSR2Q969E8 191 aaKnown RBP10.19□□□□□ -0.78
CLINT1-203ENST00000521047 ZNF428Q96B54 188 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 ISCA1Q9BUE6 129 aa10.19□□□□□ -0.78
CLINT1-203ENST00000521047 PHAXQ9H814 394 aaKnown RBP10.19□□□□□ -0.78
CLINT1-203ENST00000521047 ELL2O00472 640 aaPredicted RBP10.18□□□□□ -0.78
CLINT1-203ENST00000521047 GNAI1P63096 354 aa10.18□□□□□ -0.78
CLINT1-203ENST00000521047 NYXQ9GZU5 481 aa10.18□□□□□ -0.78
CLINT1-203ENST00000521047 DBF4Q9UBU7 674 aaPredicted RBP10.18□□□□□ -0.78
CLINT1-203ENST00000521047 ADAMTSL1Q8N6G6 1762 aa10.17□□□□□ -0.78
CLINT1-203ENST00000521047 ZC3H4Q9UPT8 1303 aaKnown RBP10.17□□□□□ -0.78
CLINT1-203ENST00000521047 GOLGA2Q08379 1002 aa10.17□□□□□ -0.78
CLINT1-203ENST00000521047 PARP10Q53GL7 1025 aa10.17□□□□□ -0.78
CLINT1-203ENST00000521047 PLBD2Q8NHP8 589 aa10.17□□□□□ -0.78
CLINT1-203ENST00000521047 IL16Q14005 1332 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 ZNF521Q96K83 1311 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 GLTPD2A6NH11 291 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
CLINT1-203ENST00000521047 TAOK3Q9H2K8 898 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 CEP350Q5VT06 3117 aa10.16□□□□□ -0.78
CLINT1-203ENST00000521047 ABCC4O15439 1325 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 ZBED9Q6R2W3 1325 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 NPHP1O15259 732 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 HCLS1P14317 486 aaPredicted RBP10.15□□□□□ -0.78
CLINT1-203ENST00000521047 FKBP4Q02790 459 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLINT1-203ENST00000521047 TRIM28Q13263 835 aaKnown RBP10.15□□□□□ -0.78
CLINT1-203ENST00000521047 G2E3Q7L622 706 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 PPP1R42Q7Z4L9 355 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 CRAMP1Q96RY5 1269 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
CLINT1-203ENST00000521047 RNF123Q5XPI4 1314 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 ZNF541Q9H0D2 1346 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 TCERG1O14776 1098 aaKnown RBP10.14□□□□□ -0.79
CLINT1-203ENST00000521047 TOMM70O94826 608 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 CALD1Q05682 793 aaKnown RBP10.14□□□□□ -0.79
CLINT1-203ENST00000521047 MKRN3Q13064 507 aaKnown RBP10.14□□□□□ -0.79
CLINT1-203ENST00000521047 CCDC93Q567U6 631 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 MFRPQ9BY79 579 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 ZNF277Q9NRM2 450 aaPredicted RBP10.14□□□□□ -0.79
CLINT1-203ENST00000521047 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
CLINT1-203ENST00000521047 SCN4AP35499 1836 aa10.14□□□□□ -0.79
CLINT1-203ENST00000521047 SH3TC1Q8TE82 1336 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 VAMP4O75379 141 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 DDNO94850 711 aaPredicted RBP10.13□□□□□ -0.79
CLINT1-203ENST00000521047 IGKV5-2P06315 115 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 HSPA6P17066 643 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 GTF2E1P29083 439 aaPredicted RBP10.13□□□□□ -0.79
CLINT1-203ENST00000521047 ALDH1B1P30837 517 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 SOGA3Q5TF21 947 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 FAM89AQ96GI7 184 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 PSMD1Q99460 953 aa10.13□□□□□ -0.79
CLINT1-203ENST00000521047 SALL2Q9Y467 1007 aaPredicted RBP10.13□□□□□ -0.79
CLINT1-203ENST00000521047 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 KDM2BQ8NHM5 1336 aa10.12□□□□□ -0.79
CLINT1-203ENST00000521047 MYH3P11055 1940 aa10.12□□□□□ -0.79
CLINT1-203ENST00000521047 FZD9O00144 591 aa10.12□□□□□ -0.79
CLINT1-203ENST00000521047 PPEF1O14829 653 aaPredicted RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 POTEJP0CG39 1038 aa10.12□□□□□ -0.79
CLINT1-203ENST00000521047 SF3B3Q15393 1217 aaKnown RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 WDR63Q8IWG1 891 aa10.12□□□□□ -0.79
CLINT1-203ENST00000521047 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 RPGRQ92834 1020 aaKnown RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
CLINT1-203ENST00000521047 TRMT112Q9UI30 125 aaKnown RBP10.12□□□□□ -0.79
CLINT1-203ENST00000521047 IARSP41252 1262 aaKnown RBP10.11□□□□□ -0.79
CLINT1-203ENST00000521047 RTKN2Q8IZC4 609 aa10.11□□□□□ -0.79
CLINT1-203ENST00000521047 DNAJC5GQ8N7S2 189 aa10.11□□□□□ -0.79
CLINT1-203ENST00000521047 JARID2Q92833 1246 aaPredicted RBP10.11□□□□□ -0.79
CLINT1-203ENST00000521047 CELF1Q92879 486 aaKnown RBP10.11□□□□□ -0.79
CLINT1-203ENST00000521047 RBM17Q96I25 401 aaKnown RBP10.11□□□□□ -0.79
CLINT1-203ENST00000521047 L3MBTL3Q96JM7 780 aaPredicted RBP10.11□□□□□ -0.79
CLINT1-203ENST00000521047 MYD88Q99836 296 aa10.11□□□□□ -0.79
CLINT1-203ENST00000521047 METTL22Q9BUU2 404 aaPredicted RBP10.11□□□□□ -0.79
CLINT1-203ENST00000521047 ATP6V0A2Q9Y487 856 aa10.11□□□□□ -0.79
CLINT1-203ENST00000521047 SPEF2Q9C093 1822 aa10.11□□□□□ -0.79
CLINT1-203ENST00000521047 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms