RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 RIC1Q4ADV7 1423 aa15.64■□□□□ 0.09
CLK4-208ENST00000520957 CTSWP56202 376 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 CELF1Q92879 486 aaKnown RBP15.63■□□□□ 0.09
CLK4-208ENST00000520957 CNKSR1Q969H4 720 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
CLK4-208ENST00000520957 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 C20orf194Q5TEA3 1177 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 DZIP1LQ8IYY4 767 aaKnown RBP15.63■□□□□ 0.09
CLK4-208ENST00000520957 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 MEIS3Q99687 375 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 GREM2Q9H772 168 aa15.63■□□□□ 0.09
CLK4-208ENST00000520957 UTYO14607 1347 aa15.62■□□□□ 0.09
CLK4-208ENST00000520957 ARHGAP27Q6ZUM4 889 aa15.62■□□□□ 0.09
CLK4-208ENST00000520957 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
CLK4-208ENST00000520957 PLA2G12BQ9BX93 195 aa15.62■□□□□ 0.09
CLK4-208ENST00000520957 COL11A2P13942 1736 aaPredicted RBP15.61■□□□□ 0.09
CLK4-208ENST00000520957 CSF1RP07333 972 aa15.61■□□□□ 0.09
CLK4-208ENST00000520957 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
CLK4-208ENST00000520957 CCDC152Q4G0S7 254 aa15.6■□□□□ 0.09
CLK4-208ENST00000520957 COL4A1P02462 1669 aa15.6■□□□□ 0.09
CLK4-208ENST00000520957 HSP90B1P14625 803 aaKnown RBP15.6■□□□□ 0.09
CLK4-208ENST00000520957 GRAPQ13588 217 aa15.6■□□□□ 0.09
CLK4-208ENST00000520957 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
CLK4-208ENST00000520957 FTSJ3Q8IY81 847 aaKnown RBP15.6■□□□□ 0.09
CLK4-208ENST00000520957 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
CLK4-208ENST00000520957 BICC1Q9H694 974 aaKnown RBP15.6■□□□□ 0.09
CLK4-208ENST00000520957 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
CLK4-208ENST00000520957 GRIN3BO60391 1043 aa15.59■□□□□ 0.09
CLK4-208ENST00000520957 ANKRD44Q8N8A2 993 aa15.59■□□□□ 0.09
CLK4-208ENST00000520957 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
CLK4-208ENST00000520957 BBOX1O75936 387 aa15.58■□□□□ 0.08
CLK4-208ENST00000520957 ITGA6P23229 1130 aa15.58■□□□□ 0.08
CLK4-208ENST00000520957 PRELPP51888 382 aa15.58■□□□□ 0.08
CLK4-208ENST00000520957 RPS8P62241 208 aaKnown RBP15.58■□□□□ 0.08
CLK4-208ENST00000520957 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.08
CLK4-208ENST00000520957 CHMP3Q9Y3E7 222 aa15.58■□□□□ 0.08
CLK4-208ENST00000520957 DDX60Q8IY21 1712 aaKnown RBP15.58■□□□□ 0.08
CLK4-208ENST00000520957 SLX4Q8IY92 1834 aa15.58■□□□□ 0.08
CLK4-208ENST00000520957 NFKBIEO00221 500 aa15.57■□□□□ 0.08
CLK4-208ENST00000520957 UBTFL1P0CB47 393 aaPredicted RBP15.57■□□□□ 0.08
CLK4-208ENST00000520957 RASSF7Q02833 373 aa15.57■□□□□ 0.08
CLK4-208ENST00000520957 COG6Q9Y2V7 657 aa15.57■□□□□ 0.08
CLK4-208ENST00000520957 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
CLK4-208ENST00000520957 ZBTB7BO15156 539 aaPredicted RBP15.57■□□□□ 0.08
CLK4-208ENST00000520957 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
CLK4-208ENST00000520957 ATP6V0A2Q9Y487 856 aa15.57■□□□□ 0.08
CLK4-208ENST00000520957 WTIPA6NIX2 430 aaPredicted RBP15.55■□□□□ 0.08
CLK4-208ENST00000520957 RABL6Q3YEC7 729 aaPredicted RBP15.55■□□□□ 0.08
CLK4-208ENST00000520957 SP8Q8IXZ3 490 aa15.55■□□□□ 0.08
CLK4-208ENST00000520957 C1orf115Q9H7X2 142 aa15.55■□□□□ 0.08
CLK4-208ENST00000520957 BRCA1P38398 1863 aaKnown RBP15.54■□□□□ 0.08
CLK4-208ENST00000520957 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
CLK4-208ENST00000520957 IFIT5Q13325 482 aaKnown RBP15.54■□□□□ 0.08
CLK4-208ENST00000520957 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
CLK4-208ENST00000520957 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
CLK4-208ENST00000520957 TAF1P21675 1872 aa15.54■□□□□ 0.08
CLK4-208ENST00000520957 GNAI3P08754 354 aa15.54■□□□□ 0.08
CLK4-208ENST00000520957 CCDC93Q567U6 631 aa15.54■□□□□ 0.08
CLK4-208ENST00000520957 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
CLK4-208ENST00000520957 LAMB2P55268 1798 aa15.53■□□□□ 0.08
CLK4-208ENST00000520957 GPSM2P81274 684 aa15.53■□□□□ 0.08
CLK4-208ENST00000520957 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
CLK4-208ENST00000520957 CCDC57Q2TAC2 916 aa15.53■□□□□ 0.08
CLK4-208ENST00000520957 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
CLK4-208ENST00000520957 RTL9Q8NET4 1388 aa15.53■□□□□ 0.08
CLK4-208ENST00000520957 CDC5LQ99459 802 aaKnown RBP15.53■□□□□ 0.08
CLK4-208ENST00000520957 PUS3Q9BZE2 481 aaKnown RBP15.53■□□□□ 0.08
CLK4-208ENST00000520957 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
CLK4-208ENST00000520957 SUPT16HQ9Y5B9 1047 aaKnown RBP15.53■□□□□ 0.08
CLK4-208ENST00000520957 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.08
CLK4-208ENST00000520957 PDE3AQ14432 1141 aa15.52■□□□□ 0.08
CLK4-208ENST00000520957 BSDC1Q9NW68 430 aaPredicted RBP15.52■□□□□ 0.08
CLK4-208ENST00000520957 MINPP1Q9UNW1 487 aa15.52■□□□□ 0.08
CLK4-208ENST00000520957 NSFL1CQ9UNZ2 370 aaKnown RBP15.52■□□□□ 0.08
CLK4-208ENST00000520957 SNED1Q8TER0 1413 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 GNAI2P04899 355 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 MS4A1P11836 297 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 RFX5P48382 616 aaPredicted RBP15.51■□□□□ 0.07
CLK4-208ENST00000520957 RTKN2Q8IZC4 609 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 MPNDQ8N594 471 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 GPR101Q96P66 508 aaPredicted RBP15.51■□□□□ 0.07
CLK4-208ENST00000520957 TAOK3Q9H2K8 898 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 SNAP23O00161 211 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 IGHMBP2P38935 993 aaKnown RBP15.51■□□□□ 0.07
CLK4-208ENST00000520957 SOGA3Q5TF21 947 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 C9orf131Q5VYM1 1079 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 HELBQ8NG08 1087 aaPredicted RBP15.51■□□□□ 0.07
CLK4-208ENST00000520957 POLLQ9UGP5 575 aa15.51■□□□□ 0.07
CLK4-208ENST00000520957 PNMA6EA0A0J9YXQ4 647 aa15.5■□□□□ 0.07
CLK4-208ENST00000520957 FKBP4Q02790 459 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLK4-208ENST00000520957 CC2D2BQ6DHV5 1058 aa15.5■□□□□ 0.07
CLK4-208ENST00000520957 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
CLK4-208ENST00000520957 MPHOSPH8Q99549 860 aa15.5■□□□□ 0.07
CLK4-208ENST00000520957 TAF5LO75529 589 aa15.49■□□□□ 0.07
CLK4-208ENST00000520957 LRRC24Q50LG9 513 aa15.49■□□□□ 0.07
CLK4-208ENST00000520957 TAF7LQ5H9L4 462 aa15.49■□□□□ 0.07
CLK4-208ENST00000520957 LDHAL6AQ6ZMR3 332 aa15.49■□□□□ 0.07
CLK4-208ENST00000520957 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
CLK4-208ENST00000520957 TMX4Q9H1E5 349 aaPredicted RBP15.49■□□□□ 0.07
CLK4-208ENST00000520957 ZBTB40Q9NUA8 1239 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms