RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 SHTN1A0MZ66 631 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 RAD17O75943 681 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 GMPSP49915 693 aaPredicted RBP11.93□□□□□ -0.5
CDH17-204ENST00000520952 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 DPP8Q6V1X1 898 aaPredicted RBP11.93□□□□□ -0.5
CDH17-204ENST00000520952 USP50Q70EL3 339 aaPredicted RBP11.93□□□□□ -0.5
CDH17-204ENST00000520952 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
CDH17-204ENST00000520952 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 GPRC5DQ9NZD1 345 aa11.93□□□□□ -0.5
CDH17-204ENST00000520952 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
CDH17-204ENST00000520952 CTCFP49711 727 aaPredicted RBP11.92□□□□□ -0.5
CDH17-204ENST00000520952 GRM1Q13255 1194 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 GRAPQ13588 217 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
CDH17-204ENST00000520952 CYP4F22Q6NT55 531 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 GRAPLQ8TC17 118 aaPredicted RBP11.92□□□□□ -0.5
CDH17-204ENST00000520952 FAM89AQ96GI7 184 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 PRDM10Q9NQV6 1147 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 ADARB2Q9NS39 739 aaKnown RBP11.92□□□□□ -0.5
CDH17-204ENST00000520952 LAMB2P55268 1798 aa11.92□□□□□ -0.5
CDH17-204ENST00000520952 YDJCA8MPS7 323 aa11.91□□□□□ -0.5
CDH17-204ENST00000520952 HIRAP54198 1017 aaPredicted RBP11.91□□□□□ -0.5
CDH17-204ENST00000520952 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
CDH17-204ENST00000520952 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
CDH17-204ENST00000520952 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
CDH17-204ENST00000520952 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
CDH17-204ENST00000520952 VPS33BQ9H267 617 aa11.91□□□□□ -0.5
CDH17-204ENST00000520952 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
CDH17-204ENST00000520952 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
CDH17-204ENST00000520952 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH17-204ENST00000520952 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
CDH17-204ENST00000520952 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
CDH17-204ENST00000520952 DLK2Q6UY11 383 aa11.9□□□□□ -0.5
CDH17-204ENST00000520952 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
CDH17-204ENST00000520952 PLBD2Q8NHP8 589 aa11.9□□□□□ -0.5
CDH17-204ENST00000520952 CELF1Q92879 486 aaKnown RBP11.9□□□□□ -0.5
CDH17-204ENST00000520952 CAPNS2Q96L46 248 aa11.9□□□□□ -0.5
CDH17-204ENST00000520952 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
CDH17-204ENST00000520952 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.51
CDH17-204ENST00000520952 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
CDH17-204ENST00000520952 AOC2O75106 756 aa11.89□□□□□ -0.51
CDH17-204ENST00000520952 TRPM4Q8TD43 1214 aa11.89□□□□□ -0.51
CDH17-204ENST00000520952 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
CDH17-204ENST00000520952 BCL2L13Q9BXK5 485 aa11.89□□□□□ -0.51
CDH17-204ENST00000520952 KCNQ5Q9NR82 932 aa11.89□□□□□ -0.51
CDH17-204ENST00000520952 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
CDH17-204ENST00000520952 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
CDH17-204ENST00000520952 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
CDH17-204ENST00000520952 COL4A1P02462 1669 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 CELF2O95319 508 aaKnown RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 GPSM2P81274 684 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 MAP2K1Q02750 393 aaPredicted RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 TNIP1Q15025 636 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 POLLQ9UGP5 575 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 TSKSQ9UJT2 592 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
CDH17-204ENST00000520952 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
CDH17-204ENST00000520952 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
CDH17-204ENST00000520952 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
CDH17-204ENST00000520952 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
CDH17-204ENST00000520952 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
CDH17-204ENST00000520952 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
CDH17-204ENST00000520952 HYPKQ9NX55 129 aa11.87□□□□□ -0.51
CDH17-204ENST00000520952 TRPM7Q96QT4 1865 aa11.87□□□□□ -0.51
CDH17-204ENST00000520952 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
CDH17-204ENST00000520952 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 PSMD14O00487 310 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 APAF1O14727 1248 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 EGFRP00533 1210 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 HOXB7P09629 217 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 ECE1P42892 770 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 SAPCD2Q86UD0 394 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 SEC31BQ9NQW1 1179 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
CDH17-204ENST00000520952 H7C1D1 291 aa11.85□□□□□ -0.51
CDH17-204ENST00000520952 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
CDH17-204ENST00000520952 TRIM28Q13263 835 aaKnown RBP11.85□□□□□ -0.51
CDH17-204ENST00000520952 TBC1D10BQ4KMP7 808 aaPredicted RBP11.85□□□□□ -0.51
CDH17-204ENST00000520952 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
CDH17-204ENST00000520952 TMC4Q7Z404 712 aa11.85□□□□□ -0.51
CDH17-204ENST00000520952 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
CDH17-204ENST00000520952 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
CDH17-204ENST00000520952 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
CDH17-204ENST00000520952 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
CDH17-204ENST00000520952 TBC1D16Q8TBP0 767 aa11.84□□□□□ -0.51
CDH17-204ENST00000520952 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms