RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 RNF217Q8TC41 542 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
SHPRH-208ENST00000520752 NCAPGQ9BPX3 1015 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
SHPRH-208ENST00000520752 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 KIF15Q9NS87 1388 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 NPC1L1Q9UHC9 1359 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 UHRF1BP1LA0JNW5 1464 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 PRMT3O60678 531 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 SLFN14P0C7P3 912 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 SMC5Q8IY18 1101 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 SNX21Q969T3 373 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 PLCD4Q9BRC7 762 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 RBM28Q9NW13 759 aaKnown RBP10.49□□□□□ -0.73
SHPRH-208ENST00000520752 SLC52A1Q9NWF4 448 aa10.49□□□□□ -0.73
SHPRH-208ENST00000520752 CCDC9Q9Y3X0 531 aaKnown RBP10.49□□□□□ -0.73
SHPRH-208ENST00000520752 MYBBP1AQ9BQG0 1328 aaKnown RBP10.49□□□□□ -0.73
SHPRH-208ENST00000520752 CFAP43Q8NDM7 1665 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 LGR5O75473 907 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 TMEM214Q6NUQ4 689 aaKnown RBP10.48□□□□□ -0.73
SHPRH-208ENST00000520752 POTEAQ6S8J7 498 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 RHBDD1Q8TEB9 315 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 USP3Q9Y6I4 520 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 MORC2Q9Y6X9 1032 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-208ENST00000520752 FMN1Q68DA7 1419 aa10.48□□□□□ -0.73
SHPRH-208ENST00000520752 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 E9PSI1 815 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 FOXO3O43524 673 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 KIF1CO43896 1103 aaKnown RBP10.47□□□□□ -0.73
SHPRH-208ENST00000520752 TNNT3P45378 269 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-208ENST00000520752 PSMA6P60900 246 aaKnown RBP10.47□□□□□ -0.73
SHPRH-208ENST00000520752 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
SHPRH-208ENST00000520752 SATB1Q01826 763 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 RAB3GAP1Q15042 981 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 TEAD4Q15561 434 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 TAS1R3Q7RTX0 852 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 SMC4Q9NTJ3 1288 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 RAI14Q9P0K7 980 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 PTPN23Q9H3S7 1636 aa10.47□□□□□ -0.73
SHPRH-208ENST00000520752 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
SHPRH-208ENST00000520752 PPP1R12BO60237 982 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-208ENST00000520752 CAPN2P17655 700 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 CHAF1AQ13111 956 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-208ENST00000520752 TERF2Q15554 542 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 GNASQ5JWF2 1037 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 Q6ZNB5 142 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 MNS1Q8NEH6 495 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 NIFKQ9BYG3 293 aaKnown RBP10.46□□□□□ -0.73
SHPRH-208ENST00000520752 PANK3Q9H999 370 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 CEP83Q9Y592 693 aa10.46□□□□□ -0.73
SHPRH-208ENST00000520752 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-208ENST00000520752 YEATS2Q9ULM3 1422 aa10.46□□□□□ -0.74
SHPRH-208ENST00000520752 BLMP54132 1417 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-208ENST00000520752 CTIFO43310 598 aaKnown RBP10.45□□□□□ -0.74
SHPRH-208ENST00000520752 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
SHPRH-208ENST00000520752 GTF2A1P52655 376 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-208ENST00000520752 TBCELQ5QJ74 424 aa10.45□□□□□ -0.74
SHPRH-208ENST00000520752 PIBF1Q8WXW3 757 aa10.45□□□□□ -0.74
SHPRH-208ENST00000520752 COL26A1Q96A83 441 aa10.45□□□□□ -0.74
SHPRH-208ENST00000520752 C2orf49Q9BVC5 232 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-208ENST00000520752 SPTLC3Q9NUV7 552 aa10.45□□□□□ -0.74
SHPRH-208ENST00000520752 FEZ2Q9UHY8 353 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-208ENST00000520752 CGNL1Q0VF96 1302 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 GOLGA6L6A8MZA4 724 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 LCE2BO14633 110 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 TPM3P06753 285 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 NOS2P35228 1153 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
SHPRH-208ENST00000520752 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
SHPRH-208ENST00000520752 EGFL6Q8IUX8 553 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
SHPRH-208ENST00000520752 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
SHPRH-208ENST00000520752 ANKRD30AQ9BXX3 1397 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 SERTM1A2A2V5 107 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 FIGNL2A6NMB9 653 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 CCDC172P0C7W6 258 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 NOP2P46087 812 aaKnown RBP10.43□□□□□ -0.74
SHPRH-208ENST00000520752 KCNA1Q09470 495 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 C4orf17Q53FE4 359 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 ICE2Q659A1 982 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 NBPF10Q6P3W6 841 aaKnown RBP10.43□□□□□ -0.74
SHPRH-208ENST00000520752 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 RPAINQ86UA6 219 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 ZDHHC1Q8WTX9 485 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 TNPO1Q92973 898 aaKnown RBP10.43□□□□□ -0.74
SHPRH-208ENST00000520752 CABP1Q9NZU7 370 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 DNMT3LQ9UJW3 386 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 CHMP3Q9Y3E7 222 aa10.43□□□□□ -0.74
SHPRH-208ENST00000520752 ARHGAP35Q9NRY4 1499 aa10.42□□□□□ -0.74
SHPRH-208ENST00000520752 EML1O00423 815 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms