RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 IBTKQ9P2D0 1353 aaPredicted RBP10.77□□□□□ -0.69
CSMD1-209ENST00000520630 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-209ENST00000520630 ADM5C9JUS6 153 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-209ENST00000520630 SLC10A3P09131 477 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 GRIPAP1Q4V328 841 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
CSMD1-209ENST00000520630 GAS2L2Q8NHY3 880 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 ATP6V0A2Q9Y487 856 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 SPEF2Q9C093 1822 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 CDHR2Q9BYE9 1310 aa10.76□□□□□ -0.69
CSMD1-209ENST00000520630 ECM29Q5VYK3 1845 aa10.75□□□□□ -0.69
CSMD1-209ENST00000520630 GPTP24298 496 aa10.75□□□□□ -0.69
CSMD1-209ENST00000520630 KIAA2012Q0VF49 1180 aa10.75□□□□□ -0.69
CSMD1-209ENST00000520630 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
CSMD1-209ENST00000520630 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
CSMD1-209ENST00000520630 VPS33BQ9H267 617 aa10.75□□□□□ -0.69
CSMD1-209ENST00000520630 GBA2Q9HCG7 927 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-209ENST00000520630 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-209ENST00000520630 RANBP2P49792 3224 aaKnown RBP10.75□□□□□ -0.69
CSMD1-209ENST00000520630 ABCC4O15439 1325 aa10.75□□□□□ -0.69
CSMD1-209ENST00000520630 ASTN2O75129 1339 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-209ENST00000520630 A0A0C4DFX4 3053 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 ERVV-1B6SEH8 477 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 GTF2E1P29083 439 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-209ENST00000520630 FXR1P51114 621 aaKnown RBP eCLIP10.74□□□□□ -0.69
CSMD1-209ENST00000520630 ZNF157P51786 506 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-209ENST00000520630 DCTN1Q14203 1278 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 MCM10Q7L590 875 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 RBM17Q96I25 401 aaKnown RBP10.74□□□□□ -0.69
CSMD1-209ENST00000520630 NYXQ9GZU5 481 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 KCNQ5Q9NR82 932 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 KNSTRNQ9Y448 316 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 MAP3K15Q6ZN16 1313 aa10.74□□□□□ -0.69
CSMD1-209ENST00000520630 ZSWIM8A7E2V4 1837 aa10.73□□□□□ -0.69
CSMD1-209ENST00000520630 RASAL3Q86YV0 1011 aa10.73□□□□□ -0.69
CSMD1-209ENST00000520630 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
CSMD1-209ENST00000520630 CCDC102AQ96A19 550 aa10.73□□□□□ -0.69
CSMD1-209ENST00000520630 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
CSMD1-209ENST00000520630 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
CSMD1-209ENST00000520630 TBC1D10BQ4KMP7 808 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-209ENST00000520630 SLC10A5Q5PT55 438 aa10.72□□□□□ -0.69
CSMD1-209ENST00000520630 KRT26Q7Z3Y9 468 aa10.72□□□□□ -0.69
CSMD1-209ENST00000520630 LRP10Q7Z4F1 713 aa10.72□□□□□ -0.69
CSMD1-209ENST00000520630 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-209ENST00000520630 R3HDMLQ9H3Y0 253 aa10.72□□□□□ -0.69
CSMD1-209ENST00000520630 MIS18AQ9NYP9 233 aa10.72□□□□□ -0.69
CSMD1-209ENST00000520630 RTL9Q8NET4 1388 aa10.72□□□□□ -0.69
CSMD1-209ENST00000520630 PSMD14O00487 310 aa10.71□□□□□ -0.69
CSMD1-209ENST00000520630 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.69
CSMD1-209ENST00000520630 TBC1D8O95759 1140 aa10.71□□□□□ -0.69
CSMD1-209ENST00000520630 MYH3P11055 1940 aa10.71□□□□□ -0.69
CSMD1-209ENST00000520630 SP8Q8IXZ3 490 aa10.71□□□□□ -0.69
CSMD1-209ENST00000520630 DPF2Q92785 391 aa10.71□□□□□ -0.69
CSMD1-209ENST00000520630 ZBTB3Q9H5J0 574 aa10.71□□□□□ -0.69
CSMD1-209ENST00000520630 OTOFQ9HC10 1997 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 H7C1D1 291 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSMD1-209ENST00000520630 TNIP1Q15025 636 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 MOB2Q70IA6 237 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 MPNDQ8N594 471 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 C2orf69Q8N8R5 385 aa10.7□□□□□ -0.7
CSMD1-209ENST00000520630 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
CSMD1-209ENST00000520630 CC2D1BQ5T0F9 858 aaKnown RBP10.69□□□□□ -0.7
CSMD1-209ENST00000520630 DPP8Q6V1X1 898 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-209ENST00000520630 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
CSMD1-209ENST00000520630 SUPT20HQ8NEM7 779 aa10.69□□□□□ -0.7
CSMD1-209ENST00000520630 GCC1Q96CN9 775 aa10.69□□□□□ -0.7
CSMD1-209ENST00000520630 CDCA5Q96FF9 252 aa10.69□□□□□ -0.7
CSMD1-209ENST00000520630 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
CSMD1-209ENST00000520630 FBXO46Q6PJ61 603 aaPredicted RBP10.68□□□□□ -0.7
CSMD1-209ENST00000520630 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
CSMD1-209ENST00000520630 DBNDD1Q9H9R9 158 aa10.68□□□□□ -0.7
CSMD1-209ENST00000520630 SCAF8Q9UPN6 1271 aaKnown RBP10.68□□□□□ -0.7
CSMD1-209ENST00000520630 RRP7AQ9Y3A4 280 aaKnown RBP10.68□□□□□ -0.7
CSMD1-209ENST00000520630 ALPK3Q96L96 1907 aa10.68□□□□□ -0.7
CSMD1-209ENST00000520630 GPR25O00155 361 aa10.67□□□□□ -0.7
CSMD1-209ENST00000520630 BBOX1O75936 387 aa10.67□□□□□ -0.7
CSMD1-209ENST00000520630 MYL6BP14649 208 aa10.67□□□□□ -0.7
CSMD1-209ENST00000520630 PDIA6Q15084 440 aa10.67□□□□□ -0.7
CSMD1-209ENST00000520630 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
CSMD1-209ENST00000520630 HCLS1P14317 486 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-209ENST00000520630 TM4SF4P48230 202 aa10.66□□□□□ -0.7
CSMD1-209ENST00000520630 EIF4A1P60842 406 aaKnown RBP10.66□□□□□ -0.7
CSMD1-209ENST00000520630 CAP1Q01518 475 aa10.66□□□□□ -0.7
CSMD1-209ENST00000520630 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-209ENST00000520630 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
CSMD1-209ENST00000520630 THUMPD2Q9BTF0 503 aaKnown RBP10.66□□□□□ -0.7
CSMD1-209ENST00000520630 GGA3Q9NZ52 723 aa10.66□□□□□ -0.7
CSMD1-209ENST00000520630 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
CSMD1-209ENST00000520630 CUL9Q8IWT3 2517 aa10.65□□□□□ -0.7
CSMD1-209ENST00000520630 A0A1B0GUL6 1792 aa10.65□□□□□ -0.7
CSMD1-209ENST00000520630 GRAPQ13588 217 aa10.65□□□□□ -0.7
CSMD1-209ENST00000520630 PROSER3Q2NL68 480 aa10.65□□□□□ -0.7
CSMD1-209ENST00000520630 KIF4BQ2VIQ3 1234 aa10.65□□□□□ -0.7
CSMD1-209ENST00000520630 PPP1R42Q7Z4L9 355 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms