RNA–Protein interactions for RNA: ENST00000520427.1

SRA1-202, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-202ENST00000520427 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
SRA1-202ENST00000520427 PDE8AO60658 829 aa19.46■□□□□ 0.71
SRA1-202ENST00000520427 ANKRD44Q8N8A2 993 aa19.46■□□□□ 0.71
SRA1-202ENST00000520427 NLRP3Q96P20 1036 aa19.46■□□□□ 0.71
SRA1-202ENST00000520427 COG6Q9Y2V7 657 aa19.46■□□□□ 0.71
SRA1-202ENST00000520427 SNED1Q8TER0 1413 aa19.45■□□□□ 0.7
SRA1-202ENST00000520427 H0YIN7 160 aa19.45■□□□□ 0.7
SRA1-202ENST00000520427 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
SRA1-202ENST00000520427 SF3B3Q15393 1217 aaKnown RBP19.45■□□□□ 0.7
SRA1-202ENST00000520427 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
SRA1-202ENST00000520427 TTLL11Q8NHH1 800 aa19.45■□□□□ 0.7
SRA1-202ENST00000520427 SEC31BQ9NQW1 1179 aa19.45■□□□□ 0.7
SRA1-202ENST00000520427 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
SRA1-202ENST00000520427 SBF1O95248 1867 aa19.45■□□□□ 0.7
SRA1-202ENST00000520427 NPR1P16066 1061 aa19.44■□□□□ 0.7
SRA1-202ENST00000520427 YBX3P16989 372 aaKnown RBP eCLIP19.44■□□□□ 0.7
SRA1-202ENST00000520427 FAM161AQ3B820 660 aa19.44■□□□□ 0.7
SRA1-202ENST00000520427 STYK1Q6J9G0 422 aa19.44■□□□□ 0.7
SRA1-202ENST00000520427 ZNF622Q969S3 477 aaKnown RBP eCLIP19.44■□□□□ 0.7
SRA1-202ENST00000520427 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
SRA1-202ENST00000520427 GREM2Q9H772 168 aa19.44■□□□□ 0.7
SRA1-202ENST00000520427 CSF1RP07333 972 aa19.43■□□□□ 0.7
SRA1-202ENST00000520427 PDE3AQ14432 1141 aa19.43■□□□□ 0.7
SRA1-202ENST00000520427 MVPQ14764 893 aaKnown RBP19.43■□□□□ 0.7
SRA1-202ENST00000520427 OLFM4Q6UX06 510 aa19.43■□□□□ 0.7
SRA1-202ENST00000520427 MASTLQ96GX5 879 aa19.43■□□□□ 0.7
SRA1-202ENST00000520427 LRRFIP2Q9Y608 721 aaKnown RBP19.43■□□□□ 0.7
SRA1-202ENST00000520427 DUOX1Q9NRD9 1551 aa19.43■□□□□ 0.7
SRA1-202ENST00000520427 RTL9Q8NET4 1388 aa19.43■□□□□ 0.7
SRA1-202ENST00000520427 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
SRA1-202ENST00000520427 PRPF40BQ6NWY9 871 aaKnown RBP19.42■□□□□ 0.7
SRA1-202ENST00000520427 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
SRA1-202ENST00000520427 C1orf115Q9H7X2 142 aa19.42■□□□□ 0.7
SRA1-202ENST00000520427 UBTFL1P0CB47 393 aaPredicted RBP19.41■□□□□ 0.7
SRA1-202ENST00000520427 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
SRA1-202ENST00000520427 LMBR1LQ6UX01 489 aa19.41■□□□□ 0.7
SRA1-202ENST00000520427 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.41■□□□□ 0.7
SRA1-202ENST00000520427 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
SRA1-202ENST00000520427 CRAMP1Q96RY5 1269 aa19.4■□□□□ 0.7
SRA1-202ENST00000520427 PIM2Q9P1W9 311 aa19.4■□□□□ 0.7
SRA1-202ENST00000520427 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
SRA1-202ENST00000520427 TTLL6Q8N841 843 aa19.39■□□□□ 0.69
SRA1-202ENST00000520427 C7orf43Q8WVR3 580 aa19.39■□□□□ 0.69
SRA1-202ENST00000520427 CRBNQ96SW2 442 aa19.39■□□□□ 0.69
SRA1-202ENST00000520427 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
SRA1-202ENST00000520427 BCS1LQ9Y276 419 aa19.39■□□□□ 0.69
SRA1-202ENST00000520427 GRAPQ13588 217 aa19.38■□□□□ 0.69
SRA1-202ENST00000520427 CCDC152Q4G0S7 254 aa19.38■□□□□ 0.69
SRA1-202ENST00000520427 GRAPLQ8TC17 118 aaPredicted RBP19.38■□□□□ 0.69
SRA1-202ENST00000520427 DICER1Q9UPY3 1922 aaKnown RBP19.38■□□□□ 0.69
SRA1-202ENST00000520427 GNAI3P08754 354 aa19.37■□□□□ 0.69
SRA1-202ENST00000520427 MS4A1P11836 297 aa19.37■□□□□ 0.69
SRA1-202ENST00000520427 ITGA6P23229 1130 aa19.37■□□□□ 0.69
SRA1-202ENST00000520427 DALRD3Q5D0E6 543 aaKnown RBP19.37■□□□□ 0.69
SRA1-202ENST00000520427 DDX46Q7L014 1031 aaKnown RBP19.37■□□□□ 0.69
SRA1-202ENST00000520427 PELP1Q8IZL8 1130 aaKnown RBP19.37■□□□□ 0.69
SRA1-202ENST00000520427 CNKSR1Q969H4 720 aa19.37■□□□□ 0.69
SRA1-202ENST00000520427 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
SRA1-202ENST00000520427 ZNF594Q96JF6 807 aaPredicted RBP19.37■□□□□ 0.69
SRA1-202ENST00000520427 CHD4Q14839 1912 aa19.36■□□□□ 0.69
SRA1-202ENST00000520427 C21orf2O43822 256 aa19.36■□□□□ 0.69
SRA1-202ENST00000520427 RFX5P48382 616 aaPredicted RBP19.36■□□□□ 0.69
SRA1-202ENST00000520427 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
SRA1-202ENST00000520427 ZBTB40Q9NUA8 1239 aa19.36■□□□□ 0.69
SRA1-202ENST00000520427 CHMP3Q9Y3E7 222 aa19.36■□□□□ 0.69
SRA1-202ENST00000520427 TIAM2Q8IVF5 1701 aa19.36■□□□□ 0.69
SRA1-202ENST00000520427 PPEF1O14829 653 aaPredicted RBP19.35■□□□□ 0.69
SRA1-202ENST00000520427 KLHDC4Q8TBB5 520 aa19.35■□□□□ 0.69
SRA1-202ENST00000520427 DDX19BQ9UMR2 479 aa19.35■□□□□ 0.69
SRA1-202ENST00000520427 COL4A5P29400 1685 aa19.35■□□□□ 0.69
SRA1-202ENST00000520427 PNMA6EA0A0J9YXQ4 647 aa19.34■□□□□ 0.69
SRA1-202ENST00000520427 GNAI2P04899 355 aa19.34■□□□□ 0.69
SRA1-202ENST00000520427 HSP90B1P14625 803 aaKnown RBP19.34■□□□□ 0.69
SRA1-202ENST00000520427 PRELPP51888 382 aa19.34■□□□□ 0.69
SRA1-202ENST00000520427 ALDH1B1P30837 517 aa19.33■□□□□ 0.68
SRA1-202ENST00000520427 NFKBIEO00221 500 aa19.32■□□□□ 0.68
SRA1-202ENST00000520427 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
SRA1-202ENST00000520427 RASSF7Q02833 373 aa19.32■□□□□ 0.68
SRA1-202ENST00000520427 MTX1Q13505 466 aa19.32■□□□□ 0.68
SRA1-202ENST00000520427 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
SRA1-202ENST00000520427 ZNF646O15015 1829 aaPredicted RBP19.32■□□□□ 0.68
SRA1-202ENST00000520427 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
SRA1-202ENST00000520427 CEP85Q6P2H3 762 aa19.31■□□□□ 0.68
SRA1-202ENST00000520427 SIRT2Q8IXJ6 389 aa19.31■□□□□ 0.68
SRA1-202ENST00000520427 EXOC6Q8TAG9 804 aa19.31■□□□□ 0.68
SRA1-202ENST00000520427 PA2G4Q9UQ80 394 aaKnown RBP19.31■□□□□ 0.68
SRA1-202ENST00000520427 ATP6V0A2Q9Y487 856 aa19.31■□□□□ 0.68
SRA1-202ENST00000520427 ARAP2Q8WZ64 1704 aa19.31■□□□□ 0.68
SRA1-202ENST00000520427 ANKRD18BA2A2Z9 1011 aa19.3■□□□□ 0.68
SRA1-202ENST00000520427 PTPN12Q05209 780 aaKnown RBP19.3■□□□□ 0.68
SRA1-202ENST00000520427 IFIT5Q13325 482 aaKnown RBP19.3■□□□□ 0.68
SRA1-202ENST00000520427 GPR162Q16538 588 aa19.3■□□□□ 0.68
SRA1-202ENST00000520427 ANKRD18AQ8IVF6 992 aa19.3■□□□□ 0.68
SRA1-202ENST00000520427 BBOX1O75936 387 aa19.29■□□□□ 0.68
SRA1-202ENST00000520427 LRRC24Q50LG9 513 aa19.29■□□□□ 0.68
SRA1-202ENST00000520427 CDC5LQ99459 802 aaKnown RBP19.29■□□□□ 0.68
SRA1-202ENST00000520427 SCN9AQ15858 1988 aa19.28■□□□□ 0.68
SRA1-202ENST00000520427 SRGAP3O43295 1099 aa19.28■□□□□ 0.68
SRA1-202ENST00000520427 GPSM2P81274 684 aa19.28■□□□□ 0.68
SRA1-202ENST00000520427 POLA2Q14181 598 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms