RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PTCD1O75127 700 aaKnown RBP8.78□□□□□ -1
SKP1-207ENST00000520417 XYLBO75191 536 aa8.78□□□□□ -1
SKP1-207ENST00000520417 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
SKP1-207ENST00000520417 PSAPL1Q6NUJ1 521 aa8.78□□□□□ -1
SKP1-207ENST00000520417 DHX32Q7L7V1 743 aaKnown RBP8.78□□□□□ -1
SKP1-207ENST00000520417 ETFBKMTQ8IXQ9 262 aa8.78□□□□□ -1
SKP1-207ENST00000520417 ZFATQ9P243 1243 aa8.78□□□□□ -1
SKP1-207ENST00000520417 TRIM28Q13263 835 aaKnown RBP8.77□□□□□ -1.01
SKP1-207ENST00000520417 HFE2Q6ZVN8 426 aa8.77□□□□□ -1.01
SKP1-207ENST00000520417 RGS9O75916 674 aaPredicted RBP8.76□□□□□ -1.01
SKP1-207ENST00000520417 SPATA31C1P0DKV0 1188 aa8.76□□□□□ -1.01
SKP1-207ENST00000520417 CHRNA4P43681 627 aa8.76□□□□□ -1.01
SKP1-207ENST00000520417 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
SKP1-207ENST00000520417 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
SKP1-207ENST00000520417 APBA3O96018 575 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 PROCP04070 461 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 ARID4AP29374 1257 aaPredicted RBP8.75□□□□□ -1.01
SKP1-207ENST00000520417 PCSK7Q16549 785 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 C20orf204Q6ZNR8 217 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 COL26A1Q96A83 441 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 NAGPAQ9UK23 515 aa8.75□□□□□ -1.01
SKP1-207ENST00000520417 SUZ12Q15022 739 aaKnown RBP8.74□□□□□ -1.01
SKP1-207ENST00000520417 ELMSAN1Q6PJG2 1045 aa8.74□□□□□ -1.01
SKP1-207ENST00000520417 PRDM6Q9NQX0 595 aa8.74□□□□□ -1.01
SKP1-207ENST00000520417 SEPT3Q9UH03 358 aa8.74□□□□□ -1.01
SKP1-207ENST00000520417 MAP3K6O95382 1288 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 PSAPP07602 524 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 NID1P14543 1247 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
SKP1-207ENST00000520417 FAM26DQ5JW98 314 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 PIK3R5Q8WYR1 880 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 FAM13BQ9NYF5 915 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 STIM2Q9P246 746 aa8.73□□□□□ -1.01
SKP1-207ENST00000520417 ZBTB42B2RXF5 422 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 TNFRSF10BO14763 440 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 SCNN1AP37088 669 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 ZAP70P43403 619 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 BAG6P46379 1132 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
SKP1-207ENST00000520417 GRIK4Q16099 956 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
SKP1-207ENST00000520417 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 NSUN5Q96P11 429 aaKnown RBP8.72□□□□□ -1.01
SKP1-207ENST00000520417 ARID3AQ99856 593 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 C11orf16Q9NQ32 467 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 KCNMB2Q9Y691 235 aa8.72□□□□□ -1.01
SKP1-207ENST00000520417 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.02
SKP1-207ENST00000520417 AFF1P51825 1210 aaKnown RBP8.71□□□□□ -1.02
SKP1-207ENST00000520417 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
SKP1-207ENST00000520417 TRPM4Q8TD43 1214 aa8.71□□□□□ -1.02
SKP1-207ENST00000520417 TLR7Q9NYK1 1049 aaKnown RBP8.71□□□□□ -1.02
SKP1-207ENST00000520417 CARNS1A5YM72 827 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 J3QW42 95 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 MMP20O60882 483 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 FURINP09958 794 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 RAC1P63000 192 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 GPLD1P80108 840 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 PLAURQ03405 335 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
SKP1-207ENST00000520417 SMG9Q9H0W8 520 aaKnown RBP8.7□□□□□ -1.02
SKP1-207ENST00000520417 A0A0A0MRY4 1105 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 ZBTB39O15060 712 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 EGFRP00533 1210 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 GHRHP01286 108 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 GATA4P43694 442 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 TRIP4Q15650 581 aaPredicted RBP8.69□□□□□ -1.02
SKP1-207ENST00000520417 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 LPIN3Q9BQK8 851 aa8.69□□□□□ -1.02
SKP1-207ENST00000520417 NRLP54845 237 aa8.68□□□□□ -1.02
SKP1-207ENST00000520417 DOC2BQ14184 412 aa8.68□□□□□ -1.02
SKP1-207ENST00000520417 ATCAYQ86WG3 371 aa8.68□□□□□ -1.02
SKP1-207ENST00000520417 NACC1Q96RE7 527 aa8.68□□□□□ -1.02
SKP1-207ENST00000520417 RBSNQ9H1K0 784 aa8.68□□□□□ -1.02
SKP1-207ENST00000520417 FNDC3AQ9Y2H6 1198 aaKnown RBP8.68□□□□□ -1.02
SKP1-207ENST00000520417 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
SKP1-207ENST00000520417 SUPT5HO00267 1087 aaKnown RBP8.67□□□□□ -1.02
SKP1-207ENST00000520417 SIK1P57059 783 aa8.67□□□□□ -1.02
SKP1-207ENST00000520417 TTC39BQ5VTQ0 682 aaPredicted RBP8.67□□□□□ -1.02
SKP1-207ENST00000520417 MSL1Q68DK7 614 aa8.67□□□□□ -1.02
SKP1-207ENST00000520417 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
SKP1-207ENST00000520417 WFDC8Q8IUA0 241 aa8.67□□□□□ -1.02
SKP1-207ENST00000520417 TMEM88BA6NKF7 163 aa8.66□□□□□ -1.02
SKP1-207ENST00000520417 AAMPQ13685 434 aa8.66□□□□□ -1.02
SKP1-207ENST00000520417 PLD4Q96BZ4 506 aa8.66□□□□□ -1.02
SKP1-207ENST00000520417 FRRS1LQ9P0K9 344 aa8.66□□□□□ -1.02
SKP1-207ENST00000520417 K7ELQ4 463 aaPredicted RBP8.65□□□□□ -1.02
SKP1-207ENST00000520417 TTC16Q8NEE8 873 aa8.65□□□□□ -1.02
SKP1-207ENST00000520417 GTF3C2Q8WUA4 911 aaPredicted RBP8.65□□□□□ -1.02
SKP1-207ENST00000520417 NUDT16Q96DE0 195 aaKnown RBP8.65□□□□□ -1.02
SKP1-207ENST00000520417 USP21Q9UK80 565 aa8.65□□□□□ -1.02
SKP1-207ENST00000520417 ADAM23O75077 832 aa8.64□□□□□ -1.03
SKP1-207ENST00000520417 ELNP15502 786 aa8.64□□□□□ -1.03
SKP1-207ENST00000520417 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
SKP1-207ENST00000520417 MTMR3Q13615 1198 aa8.64□□□□□ -1.03
SKP1-207ENST00000520417 SHISA2Q6UWI4 295 aa8.64□□□□□ -1.03
SKP1-207ENST00000520417 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
SKP1-207ENST00000520417 EDEM1Q92611 657 aa8.64□□□□□ -1.03
SKP1-207ENST00000520417 SSFA2P28290 1259 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms