RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.87■■■□□ 2.53
COL13A1-213ENST00000520267 ZNF445P59923 1031 aa30.86■■■□□ 2.53
COL13A1-213ENST00000520267 RBM27Q9P2N5 1060 aaKnown RBP30.86■■■□□ 2.53
COL13A1-213ENST00000520267 NSFL1CQ9UNZ2 370 aaKnown RBP30.86■■■□□ 2.53
COL13A1-213ENST00000520267 TAF5LO75529 589 aa30.86■■■□□ 2.53
COL13A1-213ENST00000520267 CHGBP05060 677 aa30.86■■■□□ 2.53
COL13A1-213ENST00000520267 TCIRG1Q13488 830 aa30.86■■■□□ 2.53
COL13A1-213ENST00000520267 LRRC24Q50LG9 513 aa30.86■■■□□ 2.53
COL13A1-213ENST00000520267 TAF6LQ9Y6J9 622 aa30.86■■■□□ 2.53
COL13A1-213ENST00000520267 IL15P40933 162 aaPredicted RBP30.85■■■□□ 2.53
COL13A1-213ENST00000520267 CCDC83Q8IWF9 413 aa30.85■■■□□ 2.53
COL13A1-213ENST00000520267 NEUROD6Q96NK8 337 aa30.85■■■□□ 2.53
COL13A1-213ENST00000520267 RFX7Q2KHR2 1363 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 FOXD4L6Q3SYB3 417 aaPredicted RBP30.84■■■□□ 2.53
COL13A1-213ENST00000520267 FOXD4L3Q6VB84 417 aaPredicted RBP30.84■■■□□ 2.53
COL13A1-213ENST00000520267 VSIG10Q8N0Z9 540 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 ZSCAN31Q96LW9 406 aaPredicted RBP30.84■■■□□ 2.53
COL13A1-213ENST00000520267 SMC3Q9UQE7 1217 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 ZNF609O15014 1411 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 EYA2O00167 538 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 TIMM10P62072 90 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 RNF20Q5VTR2 975 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 DDX46Q7L014 1031 aaKnown RBP30.84■■■□□ 2.53
COL13A1-213ENST00000520267 GPR108Q9NPR9 543 aa30.84■■■□□ 2.53
COL13A1-213ENST00000520267 PSMA5P28066 241 aa30.83■■■□□ 2.53
COL13A1-213ENST00000520267 FAM43AQ8N2R8 423 aa30.83■■■□□ 2.53
COL13A1-213ENST00000520267 TEX13AQ9BXU3 409 aaPredicted RBP30.83■■■□□ 2.53
COL13A1-213ENST00000520267 DISP2A7MBM2 1401 aa30.83■■■□□ 2.53
COL13A1-213ENST00000520267 COL14A1Q05707 1796 aaKnown RBP30.83■■■□□ 2.53
COL13A1-213ENST00000520267 TCHHQ07283 1943 aa30.82■■■□□ 2.52
COL13A1-213ENST00000520267 ST3GAL1Q11201 340 aa30.82■■■□□ 2.52
COL13A1-213ENST00000520267 SH2B1Q9NRF2 756 aaPredicted RBP30.82■■■□□ 2.52
COL13A1-213ENST00000520267 SYT1P21579 422 aa30.81■■■□□ 2.52
COL13A1-213ENST00000520267 ME3Q16798 604 aa30.81■■■□□ 2.52
COL13A1-213ENST00000520267 PUS3Q9BZE2 481 aaKnown RBP30.81■■■□□ 2.52
COL13A1-213ENST00000520267 SEC62Q99442 399 aaKnown RBP30.81■■■□□ 2.52
COL13A1-213ENST00000520267 TMEM63CQ9P1W3 806 aa30.81■■■□□ 2.52
COL13A1-213ENST00000520267 DTNBO60941 627 aa30.8■■■□□ 2.52
COL13A1-213ENST00000520267 USPL1Q5W0Q7 1092 aa30.8■■■□□ 2.52
COL13A1-213ENST00000520267 CCDC129Q6ZRS4 1044 aa30.8■■■□□ 2.52
COL13A1-213ENST00000520267 KIF6Q6ZMV9 814 aa30.8■■■□□ 2.52
COL13A1-213ENST00000520267 TPCN1Q9ULQ1 816 aa30.8■■■□□ 2.52
COL13A1-213ENST00000520267 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.79■■■□□ 2.52
COL13A1-213ENST00000520267 STX6O43752 255 aa30.79■■■□□ 2.52
COL13A1-213ENST00000520267 CIAO1O76071 339 aa30.79■■■□□ 2.52
COL13A1-213ENST00000520267 ZSCAN22P10073 491 aaPredicted RBP30.79■■■□□ 2.52
COL13A1-213ENST00000520267 BLOC1S2Q6QNY1 142 aa30.79■■■□□ 2.52
COL13A1-213ENST00000520267 KBTBD3Q8NAB2 608 aa30.79■■■□□ 2.52
COL13A1-213ENST00000520267 STARD3NLO95772 234 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 TRIM28Q13263 835 aaKnown RBP30.78■■■□□ 2.52
COL13A1-213ENST00000520267 GDPD2Q9HCC8 539 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 HMG20BQ9P0W2 317 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 GJB2P29033 226 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 TSGA10IPQ3SY00 556 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 NECAB1Q8N987 351 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 TCEANC2Q96MN5 208 aa30.78■■■□□ 2.52
COL13A1-213ENST00000520267 MBD3O95983 291 aa30.77■■■□□ 2.52
COL13A1-213ENST00000520267 RPS6KB1P23443 525 aa30.77■■■□□ 2.52
COL13A1-213ENST00000520267 MCMDC2Q4G0Z9 681 aa30.77■■■□□ 2.52
COL13A1-213ENST00000520267 KAT6BQ8WYB5 2073 aa30.77■■■□□ 2.52
COL13A1-213ENST00000520267 FAM89AQ96GI7 184 aa30.77■■■□□ 2.52
COL13A1-213ENST00000520267 GOLIM4O00461 696 aa30.76■■■□□ 2.52
COL13A1-213ENST00000520267 COL16A1Q07092 1604 aaPredicted RBP30.76■■■□□ 2.51
COL13A1-213ENST00000520267 BCL9O00512 1426 aa30.76■■■□□ 2.51
COL13A1-213ENST00000520267 ROBO1Q9Y6N7 1651 aa30.76■■■□□ 2.51
COL13A1-213ENST00000520267 A0A1B0GUL7 405 aa30.76■■■□□ 2.51
COL13A1-213ENST00000520267 PCCAP05165 728 aaPredicted RBP30.76■■■□□ 2.51
COL13A1-213ENST00000520267 SLC4A9Q96Q91 983 aa30.76■■■□□ 2.51
COL13A1-213ENST00000520267 PAG1Q9NWQ8 432 aa30.76■■■□□ 2.51
COL13A1-213ENST00000520267 PALLDQ8WX93 1383 aa30.75■■■□□ 2.51
COL13A1-213ENST00000520267 CCDC57Q2TAC2 916 aa30.75■■■□□ 2.51
COL13A1-213ENST00000520267 USP48Q86UV5 1035 aa30.75■■■□□ 2.51
COL13A1-213ENST00000520267 MAP3K15Q6ZN16 1313 aa30.75■■■□□ 2.51
COL13A1-213ENST00000520267 GADD45BO75293 160 aaPredicted RBP30.73■■■□□ 2.51
COL13A1-213ENST00000520267 NASPP49321 788 aaPredicted RBP30.73■■■□□ 2.51
COL13A1-213ENST00000520267 HLFQ16534 295 aa30.73■■■□□ 2.51
COL13A1-213ENST00000520267 SLFNL1Q499Z3 407 aa30.73■■■□□ 2.51
COL13A1-213ENST00000520267 CCDC85AQ96PX6 553 aaPredicted RBP30.73■■■□□ 2.51
COL13A1-213ENST00000520267 ALDH8A1Q9H2A2 487 aaPredicted RBP30.73■■■□□ 2.51
COL13A1-213ENST00000520267 PLCH1Q4KWH8 1693 aa30.73■■■□□ 2.51
COL13A1-213ENST00000520267 F13A1P00488 732 aa30.73■■■□□ 2.51
COL13A1-213ENST00000520267 TOB2Q14106 344 aaPredicted RBP30.73■■■□□ 2.51
COL13A1-213ENST00000520267 GIGYF2Q6Y7W6 1299 aaKnown RBP30.73■■■□□ 2.51
COL13A1-213ENST00000520267 SH3TC1Q8TE82 1336 aa30.73■■■□□ 2.51
COL13A1-213ENST00000520267 PRIM1P49642 420 aaKnown RBP30.72■■■□□ 2.51
COL13A1-213ENST00000520267 ZBTB38Q8NAP3 1195 aaPredicted RBP30.72■■■□□ 2.51
COL13A1-213ENST00000520267 RRAGDQ9NQL2 400 aaPredicted RBP30.72■■■□□ 2.51
COL13A1-213ENST00000520267 U3KPZ7 1027 aaPredicted RBP30.72■■■□□ 2.51
COL13A1-213ENST00000520267 CYP19A1P11511 503 aaPredicted RBP30.72■■■□□ 2.51
COL13A1-213ENST00000520267 PLA2G12BQ9BX93 195 aa30.72■■■□□ 2.51
COL13A1-213ENST00000520267 CEP126Q9P2H0 1117 aa30.72■■■□□ 2.51
COL13A1-213ENST00000520267 EXOC5O00471 708 aa30.71■■■□□ 2.51
COL13A1-213ENST00000520267 ANKRD1Q15327 319 aa30.71■■■□□ 2.51
COL13A1-213ENST00000520267 CNPY2Q9Y2B0 182 aa30.71■■■□□ 2.51
COL13A1-213ENST00000520267 LRP6O75581 1613 aa30.71■■■□□ 2.51
COL13A1-213ENST00000520267 IFIT1P09914 478 aaKnown RBP30.71■■■□□ 2.51
COL13A1-213ENST00000520267 SYNE4Q8N205 404 aa30.71■■■□□ 2.51
COL13A1-213ENST00000520267 COL22A1Q8NFW1 1626 aaPredicted RBP30.71■■■□□ 2.51
COL13A1-213ENST00000520267 CSF1RP07333 972 aa30.7■■■□□ 2.51
COL13A1-213ENST00000520267 KRT32Q14532 448 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms