RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 GRM8O00222 908 aa21.72■■□□□ 1.07
CLK4-204ENST00000520126 GRAPQ13588 217 aa21.72■■□□□ 1.07
CLK4-204ENST00000520126 CCDC93Q567U6 631 aa21.72■■□□□ 1.07
CLK4-204ENST00000520126 SOGA3Q5TF21 947 aa21.72■■□□□ 1.07
CLK4-204ENST00000520126 GRAPLQ8TC17 118 aaPredicted RBP21.72■■□□□ 1.07
CLK4-204ENST00000520126 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
CLK4-204ENST00000520126 BRPF1P55201 1214 aaPredicted RBP21.71■■□□□ 1.07
CLK4-204ENST00000520126 CTSWP56202 376 aa21.71■■□□□ 1.07
CLK4-204ENST00000520126 SEC31BQ9NQW1 1179 aa21.71■■□□□ 1.07
CLK4-204ENST00000520126 DDX60Q8IY21 1712 aaKnown RBP21.71■■□□□ 1.07
CLK4-204ENST00000520126 ARFGEF1Q9Y6D6 1849 aa21.7■■□□□ 1.06
CLK4-204ENST00000520126 BBOX1O75936 387 aa21.7■■□□□ 1.06
CLK4-204ENST00000520126 GOLGB1Q14789 3259 aaKnown RBP21.7■■□□□ 1.06
CLK4-204ENST00000520126 LAMB2P55268 1798 aa21.69■■□□□ 1.06
CLK4-204ENST00000520126 CCT4P50991 539 aaKnown RBP21.69■■□□□ 1.06
CLK4-204ENST00000520126 C9orf131Q5VYM1 1079 aa21.69■■□□□ 1.06
CLK4-204ENST00000520126 ZKSCAN2Q63HK3 967 aa21.69■■□□□ 1.06
CLK4-204ENST00000520126 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
CLK4-204ENST00000520126 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
CLK4-204ENST00000520126 RNF181Q9P0P0 153 aa21.69■■□□□ 1.06
CLK4-204ENST00000520126 TNNQ9UQP3 1299 aa21.69■■□□□ 1.06
CLK4-204ENST00000520126 CASP7P55210 303 aa21.68■■□□□ 1.06
CLK4-204ENST00000520126 ATF7IPQ6VMQ6 1270 aa21.68■■□□□ 1.06
CLK4-204ENST00000520126 TTLL11Q8NHH1 800 aa21.68■■□□□ 1.06
CLK4-204ENST00000520126 C7orf43Q8WVR3 580 aa21.68■■□□□ 1.06
CLK4-204ENST00000520126 ARHGAP45Q92619 1136 aa21.68■■□□□ 1.06
CLK4-204ENST00000520126 TAOK3Q9H2K8 898 aa21.68■■□□□ 1.06
CLK4-204ENST00000520126 NFKBIEO00221 500 aa21.67■■□□□ 1.06
CLK4-204ENST00000520126 NBPF7P0C2Y1 421 aaPredicted RBP21.67■■□□□ 1.06
CLK4-204ENST00000520126 RTKN2Q8IZC4 609 aa21.67■■□□□ 1.06
CLK4-204ENST00000520126 GREM2Q9H772 168 aa21.67■■□□□ 1.06
CLK4-204ENST00000520126 RCAN3Q9UKA8 241 aa21.67■■□□□ 1.06
CLK4-204ENST00000520126 TRIM27P14373 513 aa21.66■■□□□ 1.06
CLK4-204ENST00000520126 RPS8P62241 208 aaKnown RBP21.66■■□□□ 1.06
CLK4-204ENST00000520126 ANKRD18AQ8IVF6 992 aa21.66■■□□□ 1.06
CLK4-204ENST00000520126 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
CLK4-204ENST00000520126 ATP6V0A2Q9Y487 856 aa21.66■■□□□ 1.06
CLK4-204ENST00000520126 NPM3O75607 178 aaKnown RBP21.65■■□□□ 1.06
CLK4-204ENST00000520126 CC2D2BQ6DHV5 1058 aa21.65■■□□□ 1.06
CLK4-204ENST00000520126 SUCLG2Q96I99 432 aa21.65■■□□□ 1.06
CLK4-204ENST00000520126 LMNB1P20700 586 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 FKBP4Q02790 459 aaKnown RBP eCLIP21.64■■□□□ 1.05
CLK4-204ENST00000520126 FAM161AQ3B820 660 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 LMBR1LQ6UX01 489 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 SP8Q8IXZ3 490 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 ZNF526Q8TF50 670 aaPredicted RBP21.64■■□□□ 1.05
CLK4-204ENST00000520126 CDC5LQ99459 802 aaKnown RBP21.64■■□□□ 1.05
CLK4-204ENST00000520126 PLA2G12BQ9BX93 195 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 ZNF277Q9NRM2 450 aaPredicted RBP21.64■■□□□ 1.05
CLK4-204ENST00000520126 TAF1P21675 1872 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 CHD4Q14839 1912 aa21.64■■□□□ 1.05
CLK4-204ENST00000520126 ITGA6P23229 1130 aa21.63■■□□□ 1.05
CLK4-204ENST00000520126 TAF7LQ5H9L4 462 aa21.63■■□□□ 1.05
CLK4-204ENST00000520126 EPHA10Q5JZY3 1008 aa21.63■■□□□ 1.05
CLK4-204ENST00000520126 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
CLK4-204ENST00000520126 USP44Q9H0E7 712 aa21.63■■□□□ 1.05
CLK4-204ENST00000520126 UTRNP46939 3433 aa21.63■■□□□ 1.05
CLK4-204ENST00000520126 ANKRD18BA2A2Z9 1011 aa21.62■■□□□ 1.05
CLK4-204ENST00000520126 UBTFL1P0CB47 393 aaPredicted RBP21.62■■□□□ 1.05
CLK4-204ENST00000520126 IGHMBP2P38935 993 aaKnown RBP21.62■■□□□ 1.05
CLK4-204ENST00000520126 FOXO4P98177 505 aa21.62■■□□□ 1.05
CLK4-204ENST00000520126 TMC4Q7Z404 712 aa21.62■■□□□ 1.05
CLK4-204ENST00000520126 MPNDQ8N594 471 aa21.62■■□□□ 1.05
CLK4-204ENST00000520126 NSFL1CQ9UNZ2 370 aaKnown RBP21.62■■□□□ 1.05
CLK4-204ENST00000520126 IFIT5Q13325 482 aaKnown RBP21.61■■□□□ 1.05
CLK4-204ENST00000520126 CCDC57Q2TAC2 916 aa21.61■■□□□ 1.05
CLK4-204ENST00000520126 MPHOSPH8Q99549 860 aa21.61■■□□□ 1.05
CLK4-204ENST00000520126 CSF1RP07333 972 aa21.6■■□□□ 1.05
CLK4-204ENST00000520126 PRELPP51888 382 aa21.6■■□□□ 1.05
CLK4-204ENST00000520126 DZIP1LQ8IYY4 767 aaKnown RBP21.6■■□□□ 1.05
CLK4-204ENST00000520126 TMEM57Q8N5G2 664 aa21.6■■□□□ 1.05
CLK4-204ENST00000520126 BICC1Q9H694 974 aaKnown RBP21.6■■□□□ 1.05
CLK4-204ENST00000520126 ANKIB1Q9P2G1 1089 aa21.6■■□□□ 1.05
CLK4-204ENST00000520126 C6orf229H3BNL8 230 aa21.59■■□□□ 1.05
CLK4-204ENST00000520126 PLIN1O60240 522 aa21.59■■□□□ 1.05
CLK4-204ENST00000520126 INTS3Q68E01 1043 aaKnown RBP21.59■■□□□ 1.05
CLK4-204ENST00000520126 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
CLK4-204ENST00000520126 UTYO14607 1347 aa21.58■■□□□ 1.05
CLK4-204ENST00000520126 GPSM2P81274 684 aa21.58■■□□□ 1.05
CLK4-204ENST00000520126 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
CLK4-204ENST00000520126 MEIS3Q99687 375 aa21.58■■□□□ 1.05
CLK4-204ENST00000520126 LTBP3Q9NS15 1303 aa21.57■■□□□ 1.04
CLK4-204ENST00000520126 MYH3P11055 1940 aa21.57■■□□□ 1.04
CLK4-204ENST00000520126 IARSP41252 1262 aaKnown RBP21.57■■□□□ 1.04
CLK4-204ENST00000520126 LARGE2Q8N3Y3 721 aa21.57■■□□□ 1.04
CLK4-204ENST00000520126 SUPT20HQ8NEM7 779 aa21.57■■□□□ 1.04
CLK4-204ENST00000520126 ZNF594Q96JF6 807 aaPredicted RBP21.57■■□□□ 1.04
CLK4-204ENST00000520126 PSMD1Q99460 953 aa21.57■■□□□ 1.04
CLK4-204ENST00000520126 PPIP5K2O43314 1243 aa21.56■■□□□ 1.04
CLK4-204ENST00000520126 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
CLK4-204ENST00000520126 KAZALD1Q96I82 304 aa21.56■■□□□ 1.04
CLK4-204ENST00000520126 COL4A1P02462 1669 aa21.56■■□□□ 1.04
CLK4-204ENST00000520126 FER1L6Q2WGJ9 1857 aa21.56■■□□□ 1.04
CLK4-204ENST00000520126 RTL9Q8NET4 1388 aa21.56■■□□□ 1.04
CLK4-204ENST00000520126 RIMBP2O15034 1052 aa21.55■■□□□ 1.04
CLK4-204ENST00000520126 GNAI3P08754 354 aa21.55■■□□□ 1.04
CLK4-204ENST00000520126 JDP2Q8WYK2 163 aa21.55■■□□□ 1.04
CLK4-204ENST00000520126 BSDC1Q9NW68 430 aaPredicted RBP21.55■■□□□ 1.04
CLK4-204ENST00000520126 HDAC5Q9UQL6 1122 aa21.55■■□□□ 1.04
CLK4-204ENST00000520126 LRRFIP2Q9Y608 721 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms