RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 DDX60Q8IY21 1712 aaKnown RBP26.67■■□□□ 1.86
PTP4A3-203ENST00000520105 ABCC12Q96J65 1359 aa26.67■■□□□ 1.86
PTP4A3-203ENST00000520105 POLRMTO00411 1230 aaKnown RBP26.67■■□□□ 1.86
PTP4A3-203ENST00000520105 SLC10A5Q5PT55 438 aa26.67■■□□□ 1.86
PTP4A3-203ENST00000520105 PTPN12Q05209 780 aaKnown RBP26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 CNBD1Q8NA66 436 aa26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 GREM2Q9H772 168 aa26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 HSP90B1P14625 803 aaKnown RBP26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 NUCB1Q02818 461 aa26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 C3orf67Q6ZVT6 689 aa26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 BCL11AQ9H165 835 aa26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 SIL1Q9H173 461 aa26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 NOP58Q9Y2X3 529 aaKnown RBP26.66■■□□□ 1.86
PTP4A3-203ENST00000520105 CCDC57Q2TAC2 916 aa26.65■■□□□ 1.86
PTP4A3-203ENST00000520105 PRR5LQ6MZQ0 368 aa26.65■■□□□ 1.86
PTP4A3-203ENST00000520105 MMP10P09238 476 aa26.64■■□□□ 1.86
PTP4A3-203ENST00000520105 ZNF594Q96JF6 807 aaPredicted RBP26.64■■□□□ 1.86
PTP4A3-203ENST00000520105 LNPKQ9C0E8 428 aa26.64■■□□□ 1.85
PTP4A3-203ENST00000520105 COPRSQ9NQ92 184 aa26.64■■□□□ 1.85
PTP4A3-203ENST00000520105 SMARCA5O60264 1052 aaPredicted RBP26.63■■□□□ 1.85
PTP4A3-203ENST00000520105 ITGA6P23229 1130 aa26.63■■□□□ 1.85
PTP4A3-203ENST00000520105 IFIT5Q13325 482 aaKnown RBP26.63■■□□□ 1.85
PTP4A3-203ENST00000520105 CHD1LQ86WJ1 897 aa26.63■■□□□ 1.85
PTP4A3-203ENST00000520105 LAMB2P55268 1798 aa26.62■■□□□ 1.85
PTP4A3-203ENST00000520105 OS9Q13438 667 aaPredicted RBP26.62■■□□□ 1.85
PTP4A3-203ENST00000520105 G3BP1Q13283 466 aaKnown RBP eCLIP26.61■■□□□ 1.85
PTP4A3-203ENST00000520105 NLRP3Q96P20 1036 aa26.61■■□□□ 1.85
PTP4A3-203ENST00000520105 CCDC152Q4G0S7 254 aa26.6■■□□□ 1.85
PTP4A3-203ENST00000520105 RAB11FIP3O75154 756 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 RGS3P49796 1198 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 SF3B3Q15393 1217 aaKnown RBP26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 HSP90AB4PQ58FF6 505 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 LRRCC1Q9C099 1032 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 SEC31BQ9NQW1 1179 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 PARP3Q9Y6F1 533 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 ANKRD18BA2A2Z9 1011 aa26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 R3HDM1Q15032 1099 aaKnown RBP26.59■■□□□ 1.85
PTP4A3-203ENST00000520105 PDE4AP27815 886 aa26.58■■□□□ 1.85
PTP4A3-203ENST00000520105 ST5P78524 1137 aa26.58■■□□□ 1.85
PTP4A3-203ENST00000520105 RHPN1Q8TCX5 695 aa26.58■■□□□ 1.85
PTP4A3-203ENST00000520105 PUS3Q9BZE2 481 aaKnown RBP26.58■■□□□ 1.85
PTP4A3-203ENST00000520105 ZBTB47Q9UFB7 747 aaPredicted RBP26.58■■□□□ 1.85
PTP4A3-203ENST00000520105 TAF7LQ5H9L4 462 aa26.57■■□□□ 1.84
PTP4A3-203ENST00000520105 C16orf71Q8IYS4 520 aaPredicted RBP26.57■■□□□ 1.84
PTP4A3-203ENST00000520105 IL1RAPL2Q9NP60 686 aa26.57■■□□□ 1.84
PTP4A3-203ENST00000520105 SASH1O94885 1247 aa26.57■■□□□ 1.84
PTP4A3-203ENST00000520105 LRRC24Q50LG9 513 aa26.57■■□□□ 1.84
PTP4A3-203ENST00000520105 SLC16A10Q8TF71 515 aa26.56■■□□□ 1.84
PTP4A3-203ENST00000520105 KIF1BPQ96EK5 621 aa26.56■■□□□ 1.84
PTP4A3-203ENST00000520105 CASZ1Q86V15 1759 aa26.56■■□□□ 1.84
PTP4A3-203ENST00000520105 ATG9AQ7Z3C6 839 aa26.55■■□□□ 1.84
PTP4A3-203ENST00000520105 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.55■■□□□ 1.84
PTP4A3-203ENST00000520105 TNRC6CQ9HCJ0 1690 aaKnown RBP26.55■■□□□ 1.84
PTP4A3-203ENST00000520105 EYA2O00167 538 aa26.55■■□□□ 1.84
PTP4A3-203ENST00000520105 ERC1Q8IUD2 1116 aa26.54■■□□□ 1.84
PTP4A3-203ENST00000520105 LDHAL6AQ6ZMR3 332 aa26.53■■□□□ 1.84
PTP4A3-203ENST00000520105 RTL9Q8NET4 1388 aa26.53■■□□□ 1.84
PTP4A3-203ENST00000520105 TAF1P21675 1872 aa26.53■■□□□ 1.84
PTP4A3-203ENST00000520105 OTUD7AQ8TE49 926 aaPredicted RBP26.53■■□□□ 1.84
PTP4A3-203ENST00000520105 NRXN2Q9P2S2 1712 aa26.52■■□□□ 1.84
PTP4A3-203ENST00000520105 PSDA5PKW4 1024 aaPredicted RBP26.52■■□□□ 1.84
PTP4A3-203ENST00000520105 ZBTB7AO95365 584 aa26.52■■□□□ 1.84
PTP4A3-203ENST00000520105 TFCP2Q12800 502 aa26.51■■□□□ 1.83
PTP4A3-203ENST00000520105 CIAO1O76071 339 aa26.51■■□□□ 1.83
PTP4A3-203ENST00000520105 IL15P40933 162 aaPredicted RBP26.51■■□□□ 1.83
PTP4A3-203ENST00000520105 RIC1Q4ADV7 1423 aa26.5■■□□□ 1.83
PTP4A3-203ENST00000520105 COL4A1P02462 1669 aa26.5■■□□□ 1.83
PTP4A3-203ENST00000520105 BRIP1Q9BX63 1249 aa26.5■■□□□ 1.83
PTP4A3-203ENST00000520105 CNNM1Q9NRU3 951 aa26.5■■□□□ 1.83
PTP4A3-203ENST00000520105 RIPOR2Q9Y4F9 1068 aa26.5■■□□□ 1.83
PTP4A3-203ENST00000520105 FBXO3Q9UK99 471 aa26.49■■□□□ 1.83
PTP4A3-203ENST00000520105 CELF1Q92879 486 aaKnown RBP26.49■■□□□ 1.83
PTP4A3-203ENST00000520105 CDC5LQ99459 802 aaKnown RBP26.49■■□□□ 1.83
PTP4A3-203ENST00000520105 ATF5Q9Y2D1 282 aaPredicted RBP26.49■■□□□ 1.83
PTP4A3-203ENST00000520105 IGHMBP2P38935 993 aaKnown RBP26.48■■□□□ 1.83
PTP4A3-203ENST00000520105 CRY2Q49AN0 593 aa26.48■■□□□ 1.83
PTP4A3-203ENST00000520105 DDX46Q7L014 1031 aaKnown RBP26.48■■□□□ 1.83
PTP4A3-203ENST00000520105 CLASRPQ8N2M8 674 aaKnown RBP26.48■■□□□ 1.83
PTP4A3-203ENST00000520105 MPHOSPH8Q99549 860 aa26.48■■□□□ 1.83
PTP4A3-203ENST00000520105 ANKRD31Q8N7Z5 1873 aa26.47■■□□□ 1.83
PTP4A3-203ENST00000520105 KLRG2A4D1S0 409 aaPredicted RBP26.47■■□□□ 1.83
PTP4A3-203ENST00000520105 ANKRD18AQ8IVF6 992 aa26.47■■□□□ 1.83
PTP4A3-203ENST00000520105 PLEKHM2Q8IWE5 1019 aa26.47■■□□□ 1.83
PTP4A3-203ENST00000520105 RPGRQ92834 1020 aaKnown RBP26.46■■□□□ 1.83
PTP4A3-203ENST00000520105 EAF2Q96CJ1 260 aaPredicted RBP26.46■■□□□ 1.83
PTP4A3-203ENST00000520105 RPS8P62241 208 aaKnown RBP26.45■■□□□ 1.83
PTP4A3-203ENST00000520105 CEP126Q9P2H0 1117 aa26.45■■□□□ 1.83
PTP4A3-203ENST00000520105 SPEF2Q9C093 1822 aa26.45■■□□□ 1.83
PTP4A3-203ENST00000520105 AACSQ86V21 672 aa26.45■■□□□ 1.82
PTP4A3-203ENST00000520105 MTFR1LQ9H019 292 aa26.45■■□□□ 1.82
PTP4A3-203ENST00000520105 METTL24Q5JXM2 366 aa26.44■■□□□ 1.82
PTP4A3-203ENST00000520105 CCDC8Q9H0W5 538 aaPredicted RBP26.44■■□□□ 1.82
PTP4A3-203ENST00000520105 HELBQ8NG08 1087 aaPredicted RBP26.43■■□□□ 1.82
PTP4A3-203ENST00000520105 PDE6BP35913 854 aa26.42■■□□□ 1.82
PTP4A3-203ENST00000520105 TNNI3KQ59H18 835 aa26.42■■□□□ 1.82
PTP4A3-203ENST00000520105 BSDC1Q9NW68 430 aaPredicted RBP26.42■■□□□ 1.82
PTP4A3-203ENST00000520105 FPGT-TNNI3KV9GXZ4 949 aa26.42■■□□□ 1.82
PTP4A3-203ENST00000520105 SALL3Q9BXA9 1300 aa26.42■■□□□ 1.82
PTP4A3-203ENST00000520105 TSHZ3Q63HK5 1081 aa26.42■■□□□ 1.82
PTP4A3-203ENST00000520105 LRP5O75197 1615 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms