RNA–Protein interactions for RNA: ENST00000520047.1

RUNX1T1-222, Transcript of RUNX1 translocation partner 1, human

TSL 2

Gene RUNX1T1, Length 1,872 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-222	ENST00000520047	IL6ST	P40189	918 aa	Predicted RBP	7.82	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SOS1	Q07889	1333 aa	Predicted RBP	7.82	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	MRC1	P22897	1456 aa		7.82	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SENP3-EIF4A1	A0A087X0R7	540 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	NEUROD2	Q15784	382 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TMEM132A	Q24JP5	1023 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	HOMEZ	Q8IX15	550 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	PLEKHF1	Q96S99	279 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	CRBN	Q96SW2	442 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ZMYND15	Q9H091	742 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ZNF652	Q9Y2D9	606 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	COL15A1	P39059	1388 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ZNF831	Q5JPB2	1677 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	RRP9	O43818	475 aa	Known RBP	7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	A1BG	P04217	495 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	BICDL1	Q6ZP65	573 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	RUNDC1	Q96C34	613 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	MIS18A	Q9NYP9	233 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	WWC3	Q9ULE0	1092 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TBC1D2B	Q9UPU7	963 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	BCS1L	Q9Y276	419 aa		7.81	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	KDM2B	Q8NHM5	1336 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047		A0A0G2JLW4	131 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	KCNQ3	O43525	872 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	EIF5	P55010	431 aa	Known RBP	7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TYW1B	Q6NUM6	668 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	DZIP3	Q86Y13	1208 aa	Known RBP	7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SETDB2	Q96T68	719 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	PIM2	Q9P1W9	311 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TSPYL4	Q9UJ04	414 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	UBR3	Q6ZT12	1888 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TUBGCP6	Q96RT7	1819 aa		7.8	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SERPINB2	P05120	415 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TMPO	P42166	694 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	BCAM	P50895	628 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	NFIX	Q14938	502 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	C8orf34	Q49A92	452 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	CCDC146	Q8IYE0	955 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	DDX27	Q96GQ7	796 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ADAMTS8	Q9UP79	889 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	USP16	Q9Y5T5	823 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	HSP90AA1	P07900	732 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	DPEP1	P16444	411 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	YBX3	P16989	372 aa	Known RBP eCLIP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	GTF2E1	P29083	439 aa	Predicted RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TM4SF1	P30408	202 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	CALD1	Q05682	793 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	DALRD3	Q5D0E6	543 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ZFR	Q96KR1	1074 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	THUMPD2	Q9BTF0	503 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	BABAM1	Q9NWV8	329 aa		7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	RRP7A	Q9Y3A4	280 aa	Known RBP	7.79	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	KCP	Q6ZWJ8	1503 aa		7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047		H0YIN7	160 aa		7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	POLRMT	O00411	1230 aa	Known RBP	7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ARHGAP27	Q6ZUM4	889 aa		7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SKAP1	Q86WV1	359 aa		7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	NGEF	Q8N5V2	710 aa		7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	PDZRN3	Q9UPQ7	1066 aa		7.78	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	PLIN1	O60240	522 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	PDE6B	P35913	854 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	ST5	P78524	1137 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	DDR1	Q08345	913 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	TRAF7	Q6Q0C0	670 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CLEC4G	Q6UXB4	293 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	KIF6	Q6ZMV9	814 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	LARP6	Q9BRS8	491 aa	Known RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	GFRA3	O60609	400 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	GIGYF1	O75420	1035 aa	Predicted RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	EIF2S2	P20042	333 aa	Known RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CLCN1	P35523	988 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	PIP4K2A	P48426	406 aa	Predicted RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	EIF4A1	P60842	406 aa	Known RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	PROX2	Q3B8N5	592 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	TBC1D9B	Q66K14	1250 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	TPTE2	Q6XPS3	522 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CNBD1	Q8NA66	436 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	LRCH3	Q96II8	777 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	KIAA1468	Q9P260	1216 aa		7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	TSR3	Q9UJK0	312 aa	Known RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	COL5A3	P25940	1745 aa	Predicted RBP	7.77	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	ADAMTS7	Q9UKP4	1686 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CIC	Q96RK0	1608 aa	Predicted RBP	7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	PRAMEF22	A3QJZ6	481 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	MYL6B	P14649	208 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	BECN1	Q14457	450 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	C2CD5	Q86YS7	1000 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CDCA7L	Q96GN5	454 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CHMP4A	Q9BY43	222 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CARMIL3	Q8ND23	1372 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	COL24A1	Q17RW2	1714 aa		7.76	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	MYH14	Q7Z406	1995 aa	Known RBP	7.75	□□□□□ -1.17
RUNX1T1-222	ENST00000520047	CAMTA2	O94983	1202 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms