RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 KAT6BQ8WYB5 2073 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 A0A0D9SFI3 127 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 TOM1O60784 492 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
HMGB4-203ENST00000519684 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
HMGB4-203ENST00000519684 MED23Q9ULK4 1368 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 ZNF594Q96JF6 807 aaPredicted RBP10.12□□□□□ -0.79
HMGB4-203ENST00000519684 PLA2G12BQ9BX93 195 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 TM6SF1Q9BZW5 370 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 CEP126Q9P2H0 1117 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 CYP46A1Q9Y6A2 500 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 CDHR2Q9BYE9 1310 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 PSMA5P28066 241 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 PIP4K2BP78356 416 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 NECTIN1Q15223 517 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 LRRC24Q50LG9 513 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 CREB3L3Q68CJ9 461 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 MAP4K1Q92918 833 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 KCNB2Q92953 911 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 FAM89AQ96GI7 184 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 TTC14Q96N46 770 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 PDRG1Q9NUG6 133 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 LIMCH1Q9UPQ0 1083 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 AKAP2Q9Y2D5 859 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 ZBTB1Q9Y2K1 713 aa10.12□□□□□ -0.79
HMGB4-203ENST00000519684 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 GPTP24298 496 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
HMGB4-203ENST00000519684 AK2P54819 239 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 IFIT5Q13325 482 aaKnown RBP10.11□□□□□ -0.79
HMGB4-203ENST00000519684 VPS53Q5VIR6 699 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 MCTP1Q6DN14 999 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 DZIP3Q86Y13 1208 aaKnown RBP10.11□□□□□ -0.79
HMGB4-203ENST00000519684 EDC3Q96F86 508 aaKnown RBP10.11□□□□□ -0.79
HMGB4-203ENST00000519684 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 SPATA31A5Q5VU36 1347 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 SPATA31A7Q8IWB4 1347 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 NUP98P52948 1817 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 SPEF2Q9C093 1822 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 ERVV-1B6SEH8 477 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 PKP1Q13835 747 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 HLFQ16534 295 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 HMG20BQ9P0W2 317 aa10.11□□□□□ -0.79
HMGB4-203ENST00000519684 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.11□□□□□ -0.79
HMGB4-203ENST00000519684 MYH3P11055 1940 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 PALLDQ8WX93 1383 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 A0A1B0GUL7 405 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 SLC27A2O14975 620 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 TIMM10P62072 90 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 GORABQ5T7V8 394 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 DDX46Q7L014 1031 aaKnown RBP10.1□□□□□ -0.79
HMGB4-203ENST00000519684 RUFY3Q7L099 469 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 TICAM2Q86XR7 235 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 KBTBD3Q8NAB2 608 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 ZSCAN31Q96LW9 406 aaPredicted RBP10.1□□□□□ -0.79
HMGB4-203ENST00000519684 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 PAG1Q9NWQ8 432 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 JCADQ9P266 1359 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 GOLIM4O00461 696 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 CSF1RP07333 972 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 IFIT1P09914 478 aaKnown RBP10.1□□□□□ -0.79
HMGB4-203ENST00000519684 MCMDC2Q4G0Z9 681 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 CCDC158Q5M9N0 1113 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 ACSBG1Q96GR2 724 aa10.1□□□□□ -0.79
HMGB4-203ENST00000519684 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
HMGB4-203ENST00000519684 PUS3Q9BZE2 481 aaKnown RBP10.1□□□□□ -0.79
HMGB4-203ENST00000519684 TRMT112Q9UI30 125 aaKnown RBP10.1□□□□□ -0.79
HMGB4-203ENST00000519684 SLIT2O94813 1529 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 KRT32Q14532 448 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 LRRFIP1Q32MZ4 808 aaKnown RBP10.09□□□□□ -0.79
HMGB4-203ENST00000519684 ADCK5Q3MIX3 580 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 ZNF589Q86UQ0 364 aaPredicted RBP10.09□□□□□ -0.79
HMGB4-203ENST00000519684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.09□□□□□ -0.79
HMGB4-203ENST00000519684 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
HMGB4-203ENST00000519684 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 ZDHHC9Q9Y397 364 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
HMGB4-203ENST00000519684 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
HMGB4-203ENST00000519684 SH3TC1Q8TE82 1336 aa10.09□□□□□ -0.79
HMGB4-203ENST00000519684 ANKRD18BA2A2Z9 1011 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 TAF5LO75529 589 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 BRD1O95696 1058 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 CPA1P15085 419 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 CTSWP56202 376 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 MARCH10Q8NA82 808 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 TBC1D2BQ9UPU7 963 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 WDR33Q9C0J8 1336 aaKnown RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 RPAP1Q9BWH6 1393 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 CICQ96RK0 1608 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 RREB1Q92766 1687 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 ANKRD1Q15327 319 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms