RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 WIPF1O43516 503 aa11.03□□□□□ -0.64
PTPN12-213ENST00000519553 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
PTPN12-213ENST00000519553 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
PTPN12-213ENST00000519553 ACDQ96AP0 544 aa11.03□□□□□ -0.64
PTPN12-213ENST00000519553 MDFIQ99750 246 aa11.03□□□□□ -0.64
PTPN12-213ENST00000519553 OXCT2Q9BYC2 517 aaPredicted RBP11.03□□□□□ -0.64
PTPN12-213ENST00000519553 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
PTPN12-213ENST00000519553 SIN3BO75182 1162 aa11.02□□□□□ -0.65
PTPN12-213ENST00000519553 RARAP10276 462 aa11.02□□□□□ -0.65
PTPN12-213ENST00000519553 FCHSD1Q86WN1 690 aa11.02□□□□□ -0.65
PTPN12-213ENST00000519553 PNMA5Q96PV4 448 aa11.02□□□□□ -0.65
PTPN12-213ENST00000519553 GGA1Q9UJY5 639 aa11.02□□□□□ -0.65
PTPN12-213ENST00000519553 MAP3K6O95382 1288 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 ADH6P28332 368 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 EHHADHQ08426 723 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 DNAJC14Q6Y2X3 702 aaPredicted RBP11.01□□□□□ -0.65
PTPN12-213ENST00000519553 ZNF438Q7Z4V0 828 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 ASB16Q96NS5 453 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
PTPN12-213ENST00000519553 NEURL1BA8MQ27 555 aa11□□□□□ -0.65
PTPN12-213ENST00000519553 MMP20O60882 483 aa11□□□□□ -0.65
PTPN12-213ENST00000519553 PDE3BQ13370 1112 aa11□□□□□ -0.65
PTPN12-213ENST00000519553 TMCO4Q5TGY1 634 aa11□□□□□ -0.65
PTPN12-213ENST00000519553 SLCO4C1Q6ZQN7 724 aa11□□□□□ -0.65
PTPN12-213ENST00000519553 C1orf229Q6ZS94 237 aaPredicted RBP10.99□□□□□ -0.65
PTPN12-213ENST00000519553 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
PTPN12-213ENST00000519553 TNFRSF25Q93038 417 aa10.99□□□□□ -0.65
PTPN12-213ENST00000519553 ABI2Q9NYB9 513 aaPredicted RBP10.99□□□□□ -0.65
PTPN12-213ENST00000519553 GDF2Q9UK05 429 aaPredicted RBP10.99□□□□□ -0.65
PTPN12-213ENST00000519553 TNFRSF21O75509 655 aa10.98□□□□□ -0.65
PTPN12-213ENST00000519553 DHX32Q7L7V1 743 aaKnown RBP10.98□□□□□ -0.65
PTPN12-213ENST00000519553 TTC16Q8NEE8 873 aa10.98□□□□□ -0.65
PTPN12-213ENST00000519553 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
PTPN12-213ENST00000519553 ALKBH8Q96BT7 664 aaKnown RBP10.98□□□□□ -0.65
PTPN12-213ENST00000519553 DMRTB1Q96MA1 342 aa10.98□□□□□ -0.65
PTPN12-213ENST00000519553 TLR7Q9NYK1 1049 aaKnown RBP10.98□□□□□ -0.65
PTPN12-213ENST00000519553 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
PTPN12-213ENST00000519553 HOXD8P13378 290 aaPredicted RBP10.97□□□□□ -0.65
PTPN12-213ENST00000519553 LORP23490 312 aaPredicted RBP10.97□□□□□ -0.65
PTPN12-213ENST00000519553 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
PTPN12-213ENST00000519553 OR13H1Q8NG92 308 aa10.97□□□□□ -0.65
PTPN12-213ENST00000519553 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
PTPN12-213ENST00000519553 CHRDQ9H2X0 955 aa10.97□□□□□ -0.65
PTPN12-213ENST00000519553 CNTN3Q9P232 1028 aa10.97□□□□□ -0.65
PTPN12-213ENST00000519553 ADARB2-AS1A8MUL3 147 aa10.96□□□□□ -0.65
PTPN12-213ENST00000519553 TREHO43280 583 aa10.96□□□□□ -0.65
PTPN12-213ENST00000519553 SOX18P35713 384 aa10.96□□□□□ -0.65
PTPN12-213ENST00000519553 DSC3Q14574 896 aa10.96□□□□□ -0.65
PTPN12-213ENST00000519553 SNX29Q8TEQ0 813 aa10.96□□□□□ -0.65
PTPN12-213ENST00000519553 CYP2E1P05181 493 aaPredicted RBP10.95□□□□□ -0.66
PTPN12-213ENST00000519553 CELA2BP08218 269 aaPredicted RBP10.95□□□□□ -0.66
PTPN12-213ENST00000519553 EPXP11678 715 aa10.95□□□□□ -0.66
PTPN12-213ENST00000519553 ZSCAN29Q8IWY8 852 aaPredicted RBP10.95□□□□□ -0.66
PTPN12-213ENST00000519553 C1orf127Q8N9H9 656 aa10.95□□□□□ -0.66
PTPN12-213ENST00000519553 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
PTPN12-213ENST00000519553 ZBTB42B2RXF5 422 aa10.94□□□□□ -0.66
PTPN12-213ENST00000519553 OIP5O43482 229 aa10.94□□□□□ -0.66
PTPN12-213ENST00000519553 GPLD1P80108 840 aa10.94□□□□□ -0.66
PTPN12-213ENST00000519553 ORC1Q13415 861 aa10.94□□□□□ -0.66
PTPN12-213ENST00000519553 TTC39BQ5VTQ0 682 aaPredicted RBP10.94□□□□□ -0.66
PTPN12-213ENST00000519553 ZNF385CQ66K41 422 aaPredicted RBP10.94□□□□□ -0.66
PTPN12-213ENST00000519553 UBE2OQ9C0C9 1292 aaKnown RBP10.94□□□□□ -0.66
PTPN12-213ENST00000519553 NIF3L1Q9GZT8 377 aa10.94□□□□□ -0.66
PTPN12-213ENST00000519553 DNAJB12Q9NXW2 375 aaKnown RBP10.94□□□□□ -0.66
PTPN12-213ENST00000519553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
PTPN12-213ENST00000519553 PSAPP07602 524 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 BCRP11274 1271 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 ADH7P40394 386 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 NRLP54845 237 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 MFAP1P55081 439 aaKnown RBP10.93□□□□□ -0.66
PTPN12-213ENST00000519553 FMR1Q06787 632 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPN12-213ENST00000519553 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 NAGPAQ9UK23 515 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 SLC6A14Q9UN76 642 aa10.93□□□□□ -0.66
PTPN12-213ENST00000519553 ELOA3CA0A087WX78 387 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-213ENST00000519553 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 ELOA3DA6NLF2 546 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-213ENST00000519553 SHISA8B8ZZ34 492 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 PLAURQ03405 335 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 TBC1D8BQ0IIM8 1120 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 ELOA3BQ3SY89 546 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-213ENST00000519553 ELOA3Q8NG57 546 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 IGFLR1Q9H665 355 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 KANSL3Q9P2N6 904 aa10.92□□□□□ -0.66
PTPN12-213ENST00000519553 PHACTR2O75167 634 aa10.91□□□□□ -0.66
PTPN12-213ENST00000519553 MLLT1Q03111 559 aaPredicted RBP10.91□□□□□ -0.66
PTPN12-213ENST00000519553 NPAS4Q8IUM7 802 aa10.91□□□□□ -0.66
PTPN12-213ENST00000519553 EDARADDQ8WWZ3 215 aa10.91□□□□□ -0.66
PTPN12-213ENST00000519553 NSUN5Q96P11 429 aaKnown RBP10.91□□□□□ -0.66
PTPN12-213ENST00000519553 EREGO14944 169 aa10.9□□□□□ -0.66
PTPN12-213ENST00000519553 KIF4AO95239 1232 aa10.9□□□□□ -0.66
PTPN12-213ENST00000519553 GALNT6Q8NCL4 622 aa10.9□□□□□ -0.66
PTPN12-213ENST00000519553 ZFYVE28Q9HCC9 887 aa10.9□□□□□ -0.66
PTPN12-213ENST00000519553 USPL1Q5W0Q7 1092 aa10.89□□□□□ -0.67
PTPN12-213ENST00000519553 SVOPQ8N4V2 548 aa10.89□□□□□ -0.67
PTPN12-213ENST00000519553 PHF20L1A8MW92 1017 aa10.88□□□□□ -0.67
PTPN12-213ENST00000519553 EIF1AYO14602 144 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms