RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 BCORQ6W2J9 1755 aa9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 CYP19A1P11511 503 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 COG3Q96JB2 828 aa9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 PDZRN3Q9UPQ7 1066 aa9.76□□□□□ -0.85
CTNNA1-216ENST00000519489 TONSLQ96HA7 1378 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 CACNA1AO00555 2505 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 EYSQ5T1H1 3165 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 STK25O00506 426 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 RGL2O15211 777 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 HOXB3P14651 431 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 CAP1Q01518 475 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 RASAL3Q86YV0 1011 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 FBXO22Q8NEZ5 403 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
CTNNA1-216ENST00000519489 EIF6P56537 245 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-216ENST00000519489 CDC37L1Q7L3B6 337 aa9.74□□□□□ -0.85
CTNNA1-216ENST00000519489 HDGFL2Q7Z4V5 671 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-216ENST00000519489 EYA1Q99502 592 aa9.74□□□□□ -0.85
CTNNA1-216ENST00000519489 GBA2Q9HCG7 927 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-216ENST00000519489 STXBP5LQ9Y2K9 1186 aa9.74□□□□□ -0.85
CTNNA1-216ENST00000519489 INTS3Q68E01 1043 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-216ENST00000519489 ADM5C9JUS6 153 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 GMPSP49915 693 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 EMP3P54852 163 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 CABP4P57796 275 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 DOK7Q18PE1 504 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 OTOP1Q7RTM1 612 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 RTKN2Q8IZC4 609 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 NFATC2IPQ8NCF5 419 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 ARMC5Q96C12 935 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 MFRPQ9BY79 579 aa9.72□□□□□ -0.85
CTNNA1-216ENST00000519489 KLRG2A4D1S0 409 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 EGFRP00533 1210 aa9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 NOM1Q5C9Z4 860 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 PSMD1Q99460 953 aa9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 EMILIN1Q9Y6C2 1016 aa9.71□□□□□ -0.86
CTNNA1-216ENST00000519489 ARFGEF2Q9Y6D5 1785 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 FKTNO75072 461 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 CXCL9Q07325 125 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 DEFB123Q8N688 67 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 TRIM17Q9Y577 477 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 FLT4P35916 1363 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 PRUNE2Q8WUY3 3088 aa9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-216ENST00000519489 FYB1O15117 783 aa9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 HOXB1P14653 301 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 NPR1P16066 1061 aa9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 CANXP27824 592 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 CNBD1Q8NA66 436 aa9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 NPC1L1Q9UHC9 1359 aa9.69□□□□□ -0.86
CTNNA1-216ENST00000519489 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 LAMA2P24043 3122 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 MOB2Q70IA6 237 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 ZNF710Q8N1W2 664 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 LARGE2Q8N3Y3 721 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 FAM122AQ96E09 287 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 SNX27Q96L92 541 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 PTPN22Q9Y2R2 807 aa9.68□□□□□ -0.86
CTNNA1-216ENST00000519489 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
CTNNA1-216ENST00000519489 TM4SF4P48230 202 aa9.67□□□□□ -0.86
CTNNA1-216ENST00000519489 ZNF333Q96JL9 665 aa9.67□□□□□ -0.86
CTNNA1-216ENST00000519489 HS3ST6Q96QI5 342 aa9.67□□□□□ -0.86
CTNNA1-216ENST00000519489 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
CTNNA1-216ENST00000519489 LAMB4A4D0S4 1761 aa9.67□□□□□ -0.86
CTNNA1-216ENST00000519489 ASTN2O75129 1339 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 KRT26Q7Z3Y9 468 aa9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 SHISA4Q96DD7 197 aa9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 MRC1P22897 1456 aa9.66□□□□□ -0.86
CTNNA1-216ENST00000519489 FAM205CA6NFA0 338 aa9.65□□□□□ -0.86
CTNNA1-216ENST00000519489 CAMTA2O94983 1202 aa9.65□□□□□ -0.86
CTNNA1-216ENST00000519489 SAMD7Q7Z3H4 446 aa9.65□□□□□ -0.86
CTNNA1-216ENST00000519489 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
CTNNA1-216ENST00000519489 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-216ENST00000519489 ST5P78524 1137 aa9.64□□□□□ -0.87
CTNNA1-216ENST00000519489 AOC3Q16853 763 aa9.64□□□□□ -0.87
CTNNA1-216ENST00000519489 DPF3Q92784 378 aa9.64□□□□□ -0.87
CTNNA1-216ENST00000519489 STAP2Q9UGK3 403 aa9.64□□□□□ -0.87
CTNNA1-216ENST00000519489 CNOT7Q9UIV1 285 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-216ENST00000519489 A0A1W2PPC1 479 aa9.63□□□□□ -0.87
CTNNA1-216ENST00000519489 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-216ENST00000519489 UBE2Q1Q7Z7E8 422 aa9.63□□□□□ -0.87
CTNNA1-216ENST00000519489 NIM1KQ8IY84 436 aa9.63□□□□□ -0.87
CTNNA1-216ENST00000519489 SETDB2Q96T68 719 aa9.63□□□□□ -0.87
CTNNA1-216ENST00000519489 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
CTNNA1-216ENST00000519489 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms