RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 CCDC148Q8NFR7 591 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 ZNF215Q9UL58 517 aaPredicted RBP9.84□□□□□ -0.83
PCM1-212ENST00000519253 TUBBP07437 444 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 CTR9Q6PD62 1173 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 IQSEC2Q5JU85 1478 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 LIG1P18858 919 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 CDC37L1Q7L3B6 337 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 CRACR2AQ9BSW2 395 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 IFNKQ9P0W0 207 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 CEP131Q9UPN4 1083 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
PCM1-212ENST00000519253 CCDC12Q8WUD4 166 aaPredicted RBP9.84□□□□□ -0.83
PCM1-212ENST00000519253 SLC27A2O14975 620 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 CDC25BP30305 580 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 SYKP43405 635 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 CPSF1Q10570 1443 aaKnown RBP9.83□□□□□ -0.84
PCM1-212ENST00000519253 MED14O60244 1454 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 KIAA0754O94854 1291 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 HOXB7P09629 217 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 RDXP35241 583 aaKnown RBP9.83□□□□□ -0.84
PCM1-212ENST00000519253 MAPK8IP2Q13387 824 aaPredicted RBP9.83□□□□□ -0.84
PCM1-212ENST00000519253 MCMDC2Q4G0Z9 681 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 KSR2Q6VAB6 950 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 CHPF2Q9P2E5 772 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 MRVI1Q9Y6F6 885 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 FOXO3O43524 673 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 ME3Q16798 604 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 GOLGA1Q92805 767 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 SPTLC2O15270 562 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 GTF3C6Q969F1 213 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 GOLGA8BA8MQT2 603 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 NAA16Q6N069 864 aaPredicted RBP9.83□□□□□ -0.84
PCM1-212ENST00000519253 DHX32Q7L7V1 743 aaKnown RBP9.83□□□□□ -0.84
PCM1-212ENST00000519253 ASXL2Q76L83 1435 aa9.83□□□□□ -0.84
PCM1-212ENST00000519253 TXLNAP40222 546 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 ANKRD24Q8TF21 1146 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 LSG1Q9H089 658 aaKnown RBP9.82□□□□□ -0.84
PCM1-212ENST00000519253 MAGEC2Q9UBF1 373 aaPredicted RBP9.82□□□□□ -0.84
PCM1-212ENST00000519253 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
PCM1-212ENST00000519253 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
PCM1-212ENST00000519253 FAM69CQ0P6D2 419 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 LRRC8AQ8IWT6 810 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 KCNH5Q8NCM2 988 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 PTPDC1A2A3K4 754 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 GRM8O00222 908 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 POLR3DP05423 398 aaPredicted RBP9.82□□□□□ -0.84
PCM1-212ENST00000519253 MYL6BP14649 208 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 NLRP2Q9NX02 1062 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 IFIT1P09914 478 aaKnown RBP9.82□□□□□ -0.84
PCM1-212ENST00000519253 BRAPQ7Z569 592 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 CEP112Q8N8E3 955 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 MAP3K4Q9Y6R4 1608 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 KANK3Q6NY19 840 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
PCM1-212ENST00000519253 EVCP57679 992 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 PDE4CQ08493 712 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 CCDC191Q8NCU4 936 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 MPHOSPH8Q99549 860 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.81□□□□□ -0.842e-7■■□□□ 13.2
PCM1-212ENST00000519253 MYO5CQ9NQX4 1742 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 PNPLA6Q8IY17 1366 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 MAP3K5Q99683 1374 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 ATP2B3Q16720 1220 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 EYA1Q99502 592 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 STIM1Q13586 685 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 PA2G4Q9UQ80 394 aaKnown RBP9.81□□□□□ -0.84
PCM1-212ENST00000519253 SHTN1A0MZ66 631 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 MYL5Q02045 173 aa9.81□□□□□ -0.84
PCM1-212ENST00000519253 SMARCC1Q92922 1105 aaPredicted RBP9.81□□□□□ -0.84
PCM1-212ENST00000519253 PHAXQ9H814 394 aaKnown RBP9.81□□□□□ -0.84
PCM1-212ENST00000519253 CCDC175P0C221 793 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 LRRC2Q9BYS8 371 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 SLC26A8Q96RN1 970 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 MYD88Q99836 296 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 NACAP1Q9BZK3 213 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 DDX41Q9UJV9 622 aaKnown RBP9.8□□□□□ -0.84
PCM1-212ENST00000519253 AKAP2Q9Y2D5 859 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
PCM1-212ENST00000519253 NCBP1Q09161 790 aaKnown RBP9.8□□□□□ -0.84
PCM1-212ENST00000519253 CCDC57Q2TAC2 916 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 UNC5CLQ8IV45 518 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 CACTINQ8WUQ7 758 aaKnown RBP9.8□□□□□ -0.84
PCM1-212ENST00000519253 UGGT1Q9NYU2 1555 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 TET3O43151 1660 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 ANXA1P04083 346 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 TATP17735 454 aaPredicted RBP9.8□□□□□ -0.84
PCM1-212ENST00000519253 SHROOM2Q13796 1616 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 CTAGE15A4D2H0 777 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 ZNF213O14771 459 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 CTAGE8P0CG41 777 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 CAPN2P17655 700 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 CTAGE6Q86UF2 777 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 CTAGE4Q8IX94 777 aa9.8□□□□□ -0.84
PCM1-212ENST00000519253 MAP3K19Q56UN5 1328 aa9.79□□□□□ -0.84
PCM1-212ENST00000519253 POGZQ7Z3K3 1410 aa9.79□□□□□ -0.84
PCM1-212ENST00000519253 GOLIM4O00461 696 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms