RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 NEXNQ0ZGT2 675 aa9.62□□□□□ -0.87
SDCBP-206ENST00000519115 TRIM28Q13263 835 aaKnown RBP9.62□□□□□ -0.87
SDCBP-206ENST00000519115 CWF19L2Q2TBE0 894 aaKnown RBP9.62□□□□□ -0.87
SDCBP-206ENST00000519115 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
SDCBP-206ENST00000519115 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
SDCBP-206ENST00000519115 CNKSR1Q969H4 720 aa9.62□□□□□ -0.87
SDCBP-206ENST00000519115 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
SDCBP-206ENST00000519115 CWC25Q9NXE8 425 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-206ENST00000519115 ZBTB12Q9Y330 459 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-206ENST00000519115 KIF16BQ96L93 1317 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 SLC10A5Q5PT55 438 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 CCDC191Q8NCU4 936 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 DNAAF4Q8WXU2 420 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 SSH1Q8WYL5 1049 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
SDCBP-206ENST00000519115 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
SDCBP-206ENST00000519115 IRS4O14654 1257 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-206ENST00000519115 PCCAP05165 728 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-206ENST00000519115 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
SDCBP-206ENST00000519115 ZBTB38Q8NAP3 1195 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-206ENST00000519115 SMC4Q9NTJ3 1288 aa9.6□□□□□ -0.87
SDCBP-206ENST00000519115 PPP4R2Q9NY27 417 aa9.6□□□□□ -0.87
SDCBP-206ENST00000519115 LRRC37AA6NMS7 1700 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 NFKBIEO00221 500 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 ALDH1B1P30837 517 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 HOXA10P31260 410 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-206ENST00000519115 C9orf131Q5VYM1 1079 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 UBE3BQ7Z3V4 1068 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 RBM17Q96I25 401 aaKnown RBP9.59□□□□□ -0.87
SDCBP-206ENST00000519115 RNF181Q9P0P0 153 aa9.59□□□□□ -0.87
SDCBP-206ENST00000519115 ABCC4O15439 1325 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-206ENST00000519115 PRELPP51888 382 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 GCKRQ14397 625 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 CCDC93Q567U6 631 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 ZKSCAN2Q63HK3 967 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 DDX46Q7L014 1031 aaKnown RBP9.58□□□□□ -0.88
SDCBP-206ENST00000519115 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-206ENST00000519115 LINS1Q8NG48 757 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 ZNF526Q8TF50 670 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-206ENST00000519115 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-206ENST00000519115 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
SDCBP-206ENST00000519115 PTPRCP08575 1304 aa9.57□□□□□ -0.88
SDCBP-206ENST00000519115 BEND3Q5T5X7 828 aa9.57□□□□□ -0.88
SDCBP-206ENST00000519115 SOGA3Q5TF21 947 aa9.57□□□□□ -0.88
SDCBP-206ENST00000519115 ATF7IPQ6VMQ6 1270 aa9.57□□□□□ -0.88
SDCBP-206ENST00000519115 TAOK3Q9H2K8 898 aa9.57□□□□□ -0.88
SDCBP-206ENST00000519115 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 PDE8AO60658 829 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 BCAR3O75815 825 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 LMNB1P20700 586 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 CTSWP56202 376 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
SDCBP-206ENST00000519115 CELF1Q92879 486 aaKnown RBP9.56□□□□□ -0.88
SDCBP-206ENST00000519115 API5Q9BZZ5 524 aaKnown RBP9.56□□□□□ -0.88
SDCBP-206ENST00000519115 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 LTBP3Q9NS15 1303 aa9.56□□□□□ -0.88
SDCBP-206ENST00000519115 DUOX1Q9NRD9 1551 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 H7C1W4 665 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 HSP90B1P14625 803 aaKnown RBP9.55□□□□□ -0.88
SDCBP-206ENST00000519115 CASP7P55210 303 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 GRAPQ13588 217 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 CCDC152Q4G0S7 254 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 GRAPLQ8TC17 118 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-206ENST00000519115 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 ZNF277Q9NRM2 450 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-206ENST00000519115 ATP6V0A2Q9Y487 856 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 LTBP1Q14766 1721 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 A0A1B0GUL6 1792 aa9.55□□□□□ -0.88
SDCBP-206ENST00000519115 GRM8O00222 908 aa9.54□□□□□ -0.88
SDCBP-206ENST00000519115 ALDH1L1O75891 902 aa9.54□□□□□ -0.88
SDCBP-206ENST00000519115 FKBP4Q02790 459 aaKnown RBP eCLIP9.54□□□□□ -0.88
SDCBP-206ENST00000519115 DZIP1LQ8IYY4 767 aaKnown RBP9.54□□□□□ -0.88
SDCBP-206ENST00000519115 RTKN2Q8IZC4 609 aa9.54□□□□□ -0.88
SDCBP-206ENST00000519115 GREM2Q9H772 168 aa9.54□□□□□ -0.88
SDCBP-206ENST00000519115 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-206ENST00000519115 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
SDCBP-206ENST00000519115 COL4A5P29400 1685 aa9.54□□□□□ -0.88
SDCBP-206ENST00000519115 BBOX1O75936 387 aa9.53□□□□□ -0.88
SDCBP-206ENST00000519115 FAM161AQ3B820 660 aa9.53□□□□□ -0.88
SDCBP-206ENST00000519115 CC2D2BQ6DHV5 1058 aa9.53□□□□□ -0.88
SDCBP-206ENST00000519115 TTLL11Q8NHH1 800 aa9.53□□□□□ -0.88
SDCBP-206ENST00000519115 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
SDCBP-206ENST00000519115 TNNQ9UQP3 1299 aa9.53□□□□□ -0.88
SDCBP-206ENST00000519115 NBPF7P0C2Y1 421 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 TRIM27P14373 513 aa9.52□□□□□ -0.89
SDCBP-206ENST00000519115 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 RPS8P62241 208 aaKnown RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 MKRN4PQ13434 485 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 EPHA10Q5JZY3 1008 aa9.52□□□□□ -0.89
SDCBP-206ENST00000519115 INTS3Q68E01 1043 aaKnown RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 SP8Q8IXZ3 490 aa9.52□□□□□ -0.89
SDCBP-206ENST00000519115 FRAT1Q92837 279 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-206ENST00000519115 PSMD1Q99460 953 aa9.52□□□□□ -0.89
SDCBP-206ENST00000519115 PLA2G12BQ9BX93 195 aa9.52□□□□□ -0.89
SDCBP-206ENST00000519115 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms