RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 EDEM1Q92611 657 aa7.12□□□□□ -1.27
SKP1-205ENST00000519054 NUDT16Q96DE0 195 aaKnown RBP7.12□□□□□ -1.27
SKP1-205ENST00000519054 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
SKP1-205ENST00000519054 FAM13AO94988 1023 aa7.11□□□□□ -1.27
SKP1-205ENST00000519054 MAP3K6O95382 1288 aa7.11□□□□□ -1.27
SKP1-205ENST00000519054 IRS1P35568 1242 aa7.11□□□□□ -1.27
SKP1-205ENST00000519054 FKBP4Q02790 459 aaKnown RBP eCLIP7.11□□□□□ -1.27
SKP1-205ENST00000519054 DNM1Q05193 864 aaKnown RBP7.11□□□□□ -1.27
SKP1-205ENST00000519054 SF3B2Q13435 895 aaKnown RBP7.11□□□□□ -1.27
SKP1-205ENST00000519054 AAMPQ13685 434 aa7.11□□□□□ -1.27
SKP1-205ENST00000519054 DHX32Q7L7V1 743 aaKnown RBP7.11□□□□□ -1.27
SKP1-205ENST00000519054 BEND7Q8N7W2 519 aaPredicted RBP7.11□□□□□ -1.27
SKP1-205ENST00000519054 SLC6A14Q9UN76 642 aa7.11□□□□□ -1.27
SKP1-205ENST00000519054 H3BRB1 525 aa7.1□□□□□ -1.27
SKP1-205ENST00000519054 RNF225M0QZC1 329 aaPredicted RBP7.1□□□□□ -1.27
SKP1-205ENST00000519054 NPR3P17342 541 aa7.1□□□□□ -1.27
SKP1-205ENST00000519054 DGKGP49619 791 aa7.1□□□□□ -1.27
SKP1-205ENST00000519054 MLLT1Q03111 559 aaPredicted RBP7.1□□□□□ -1.27
SKP1-205ENST00000519054 TXNDC2Q86VQ3 553 aa7.1□□□□□ -1.27
SKP1-205ENST00000519054 TUT1Q9H6E5 874 aaKnown RBP7.1□□□□□ -1.27
SKP1-205ENST00000519054 MKL2Q9ULH7 1088 aa7.1□□□□□ -1.27
SKP1-205ENST00000519054 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
SKP1-205ENST00000519054 STARD13Q9Y3M8 1113 aa7.1□□□□□ -1.27
SKP1-205ENST00000519054 PHF20L1A8MW92 1017 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 ICMTO60725 284 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 MMP20O60882 483 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 PDGFAP04085 211 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 ALKBH2Q6NS38 261 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 NLRP13Q86W25 1043 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 EGFL7Q9UHF1 273 aa7.09□□□□□ -1.27
SKP1-205ENST00000519054 ZBTB42B2RXF5 422 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 M0R082 166 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 BRD1O95696 1058 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 ALBP02768 609 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 CPB1P15086 417 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 PCSK2P16519 638 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
SKP1-205ENST00000519054 KANK3Q6NY19 840 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 LINC00114Q6XXX2 140 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 C8orf86Q6ZUL3 223 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 HFE2Q6ZVN8 426 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 FAM35AQ86V20 835 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 GLYCTKQ8IVS8 523 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 ZNF417Q8TAU3 575 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
SKP1-205ENST00000519054 ZNF587Q96SQ5 575 aaPredicted RBP7.08□□□□□ -1.28
SKP1-205ENST00000519054 TLR7Q9NYK1 1049 aaKnown RBP7.08□□□□□ -1.28
SKP1-205ENST00000519054 NAGPAQ9UK23 515 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 POLIQ9UNA4 740 aa7.08□□□□□ -1.28
SKP1-205ENST00000519054 A6NHS1 94 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 PSAPP07602 524 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 KCNMA1Q12791 1236 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 MICALL1Q8N3F8 863 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 TRPM4Q8TD43 1214 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
SKP1-205ENST00000519054 NSUN5Q96P11 429 aaKnown RBP7.07□□□□□ -1.28
SKP1-205ENST00000519054 GNB5O14775 395 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 FZD6O60353 706 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 GSK3AP49840 483 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 GPLD1P80108 840 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 RASSF7Q02833 373 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 PLAURQ03405 335 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 PCSK7Q16549 785 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
SKP1-205ENST00000519054 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 TTC16Q8NEE8 873 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 GGNBP2Q9H3C7 697 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 SUV39H2Q9H5I1 410 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 ELP3Q9H9T3 547 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 TMEM63CQ9P1W3 806 aa7.06□□□□□ -1.28
SKP1-205ENST00000519054 J3QW42 95 aa7.05□□□□□ -1.28
SKP1-205ENST00000519054 RPLP1P05386 114 aaKnown RBP7.05□□□□□ -1.28
SKP1-205ENST00000519054 NRLP54845 237 aa7.05□□□□□ -1.28
SKP1-205ENST00000519054 PDE12Q6L8Q7 609 aaKnown RBP7.05□□□□□ -1.28
SKP1-205ENST00000519054 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
SKP1-205ENST00000519054 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
SKP1-205ENST00000519054 ABI2Q9NYB9 513 aaPredicted RBP7.05□□□□□ -1.28
SKP1-205ENST00000519054 LILRB5O75023 590 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 EIF2AK2P19525 551 aaKnown RBP7.04□□□□□ -1.28
SKP1-205ENST00000519054 ECM1Q16610 540 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 ELMSAN1Q6PJG2 1045 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 OR13H1Q8NG92 308 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 TRIM11Q96F44 468 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
SKP1-205ENST00000519054 LOC102724428A0A0B4J2F2 783 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 PIK3R2O00459 728 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 RGS9O75916 674 aaPredicted RBP7.03□□□□□ -1.28
SKP1-205ENST00000519054 GDF11O95390 407 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 CYP2E1P05181 493 aaPredicted RBP7.03□□□□□ -1.28
SKP1-205ENST00000519054 SOX18P35713 384 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 SIK1P57059 783 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 ARHGAP4P98171 946 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 PLVAPQ9BX97 442 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
SKP1-205ENST00000519054 GNEQ9Y223 722 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms