RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RNF34Q969K3 372 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 KLF16Q9BXK1 252 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 CCSER2Q9H7U1 834 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 PKD2L1Q9P0L9 805 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 PPP1R1BQ9UD71 204 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 ADCY10Q96PN6 1610 aa6.85□□□□□ -1.31
CTNNA1-212ENST00000518919 PRG4Q92954 1404 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 KIF14Q15058 1648 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 A6NHS1 94 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 J3QL48 77 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 RAD51AP2Q09MP3 1159 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 C4orf17Q53FE4 359 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 PIK3R5Q8WYR1 880 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 CRELD1Q96HD1 420 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 CFHR5Q9BXR6 569 aa6.84□□□□□ -1.31
CTNNA1-212ENST00000518919 GCC2Q8IWJ2 1684 aa6.84□□□□□ -1.32
CTNNA1-212ENST00000518919 MICAL2O94851 1124 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 TATP17735 454 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 CYP4X1Q8N118 509 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 UBXN4Q92575 508 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 AIDAQ96BJ3 306 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 GRIP2Q9C0E4 1043 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 DNAJC25Q9H1X3 360 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 ZDHHC3Q9NYG2 299 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 SPG7Q9UQ90 795 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 BCS1LQ9Y276 419 aa6.83□□□□□ -1.32
CTNNA1-212ENST00000518919 CLASP1Q7Z460 1538 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 CPNE3O75131 537 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 IDH3AP50213 366 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 IER5Q5VY09 327 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 HSH2DQ96JZ2 352 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 TGIF2Q9GZN2 237 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 POLMQ9NP87 494 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 GPC6Q9Y625 555 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 KDM6BO15054 1643 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 DNMT1P26358 1616 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 UACAQ9BZF9 1416 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 ERCC6L2Q5T890 1561 aa6.82□□□□□ -1.32
CTNNA1-212ENST00000518919 ATP10BO94823 1461 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 ABCC10Q5T3U5 1492 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 OPLAHO14841 1288 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 EIF4BP23588 611 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 NBPF10Q6P3W6 841 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 SUSD3Q96L08 255 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 TSEN34Q9BSV6 310 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 AK5Q9Y6K8 562 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 ABCC5O15440 1437 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 DAPK1P53355 1430 aa6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 GPATCH8Q9UKJ3 1502 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-212ENST00000518919 DENND4BO75064 1496 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 CAMSAP2Q08AD1 1489 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 PHKA2P46019 1235 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 ARSDP51689 593 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 IFFO2Q5TF58 517 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 BICDL1Q6ZP65 573 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 SNX29Q8TEQ0 813 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 TINF2Q9BSI4 451 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 ITSN2Q9NZM3 1697 aa6.8□□□□□ -1.32
CTNNA1-212ENST00000518919 PTPRGP23470 1445 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 TNFRSF10AO00220 468 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 SPINT1O43278 529 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 UPP2O95045 317 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 DIEXFQ68CQ4 756 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 ZNF438Q7Z4V0 828 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 SPNS2Q8IVW8 549 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 ZNF280CQ8ND82 737 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 CAPN10Q9HC96 672 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 ANKIB1Q9P2G1 1089 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 FOXD3Q9UJU5 478 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 FNDC3AQ9Y2H6 1198 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 ROCK1Q13464 1354 aa6.79□□□□□ -1.32
CTNNA1-212ENST00000518919 KDM5BQ9UGL1 1544 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 SPATA31C2B4DYI2 1134 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 TNFRSF21O75509 655 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 CTSHP09668 335 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 SMPD1P17405 629 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 ATP4AP20648 1035 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 KLRG1Q96E93 195 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 NEUROD4Q9HD90 331 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 DMGDHQ9UI17 866 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 USP20Q9Y2K6 914 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 V9GY48 417 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 ADGRL2O95490 1459 aa6.78□□□□□ -1.32
CTNNA1-212ENST00000518919 CROCC2H7BZ55 1655 aa6.77□□□□□ -1.32
CTNNA1-212ENST00000518919 ZNF644Q9H582 1327 aaPredicted RBP6.77□□□□□ -1.32
CTNNA1-212ENST00000518919 ABCC2Q92887 1545 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 UBAP1LF5GYI3 381 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 GDF9O60383 454 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 PHACTR2O75167 634 aa6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 CTSOP43234 321 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-212ENST00000518919 GNL2Q13823 731 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms