RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 EFCC1Q9HA90 598 aa8.36□□□□□ -1.07
HDAC2-204ENST00000518756 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
HDAC2-204ENST00000518756 SELPP16109 830 aa8.35□□□□□ -1.07
HDAC2-204ENST00000518756 ADGRE1Q14246 886 aa8.35□□□□□ -1.07
HDAC2-204ENST00000518756 PRSS36Q5K4E3 855 aa8.35□□□□□ -1.07
HDAC2-204ENST00000518756 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
HDAC2-204ENST00000518756 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
HDAC2-204ENST00000518756 USP21Q9UK80 565 aa8.35□□□□□ -1.07
HDAC2-204ENST00000518756 CPB1P15086 417 aa8.34□□□□□ -1.07
HDAC2-204ENST00000518756 AFF1P51825 1210 aaKnown RBP8.34□□□□□ -1.07
HDAC2-204ENST00000518756 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
HDAC2-204ENST00000518756 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
HDAC2-204ENST00000518756 FAM35AQ86V20 835 aa8.34□□□□□ -1.07
HDAC2-204ENST00000518756 TXNRD3Q86VQ6 643 aa8.34□□□□□ -1.07
HDAC2-204ENST00000518756 DMRTC2Q8IXT2 367 aaPredicted RBP8.34□□□□□ -1.07
HDAC2-204ENST00000518756 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
HDAC2-204ENST00000518756 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
HDAC2-204ENST00000518756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC2-204ENST00000518756 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
HDAC2-204ENST00000518756 IDH3AP50213 366 aa8.33□□□□□ -1.08
HDAC2-204ENST00000518756 NRG1Q02297 640 aaPredicted RBP8.33□□□□□ -1.08
HDAC2-204ENST00000518756 DGKZQ13574 1117 aa8.33□□□□□ -1.08
HDAC2-204ENST00000518756 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
HDAC2-204ENST00000518756 C1orf115Q9H7X2 142 aa8.33□□□□□ -1.08
HDAC2-204ENST00000518756 FAM69CQ0P6D2 419 aa8.32□□□□□ -1.08
HDAC2-204ENST00000518756 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
HDAC2-204ENST00000518756 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
HDAC2-204ENST00000518756 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
HDAC2-204ENST00000518756 MLLT1Q03111 559 aaPredicted RBP8.31□□□□□ -1.08
HDAC2-204ENST00000518756 TMEM164Q5U3C3 297 aa8.31□□□□□ -1.08
HDAC2-204ENST00000518756 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
HDAC2-204ENST00000518756 GRNP28799 593 aaKnown RBP8.3□□□□□ -1.08
HDAC2-204ENST00000518756 INPP5BP32019 993 aa8.3□□□□□ -1.08
HDAC2-204ENST00000518756 ARSDP51689 593 aa8.3□□□□□ -1.08
HDAC2-204ENST00000518756 PCSK7Q16549 785 aa8.3□□□□□ -1.08
HDAC2-204ENST00000518756 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
HDAC2-204ENST00000518756 DHX32Q7L7V1 743 aaKnown RBP8.3□□□□□ -1.08
HDAC2-204ENST00000518756 PRIMPOLQ96LW4 560 aa8.3□□□□□ -1.08
HDAC2-204ENST00000518756 MYO15BQ96JP2 1530 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 PRMT3O60678 531 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 H2AFB1P0C5Y9 115 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 H2AFB2P0C5Z0 115 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 RARAP10276 462 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 FKBP5Q13451 457 aaPredicted RBP8.29□□□□□ -1.08
HDAC2-204ENST00000518756 OCLNQ16625 522 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 CLP1Q92989 425 aaKnown RBP8.29□□□□□ -1.08
HDAC2-204ENST00000518756 MYO19Q96H55 970 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 QTRT2Q9H974 415 aaKnown RBP8.29□□□□□ -1.08
HDAC2-204ENST00000518756 ZFP64Q9NPA5 681 aa8.29□□□□□ -1.08
HDAC2-204ENST00000518756 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
HDAC2-204ENST00000518756 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
HDAC2-204ENST00000518756 WFDC8Q8IUA0 241 aa8.28□□□□□ -1.08
HDAC2-204ENST00000518756 LPIN3Q9BQK8 851 aa8.28□□□□□ -1.08
HDAC2-204ENST00000518756 ZFATQ9P243 1243 aa8.28□□□□□ -1.08
HDAC2-204ENST00000518756 SASH3O75995 380 aa8.27□□□□□ -1.09
HDAC2-204ENST00000518756 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
HDAC2-204ENST00000518756 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
HDAC2-204ENST00000518756 COL26A1Q96A83 441 aa8.27□□□□□ -1.09
HDAC2-204ENST00000518756 CXXC1Q9P0U4 656 aaPredicted RBP8.27□□□□□ -1.09
HDAC2-204ENST00000518756 MICAL2O94851 1124 aa8.26□□□□□ -1.09
HDAC2-204ENST00000518756 EIF2AK2P19525 551 aaKnown RBP8.26□□□□□ -1.09
HDAC2-204ENST00000518756 ARID4AP29374 1257 aaPredicted RBP8.26□□□□□ -1.09
HDAC2-204ENST00000518756 PLAURQ03405 335 aa8.26□□□□□ -1.09
HDAC2-204ENST00000518756 C11orf91Q3C1V1 193 aa8.26□□□□□ -1.09
HDAC2-204ENST00000518756 IFT43Q96FT9 208 aa8.26□□□□□ -1.09
HDAC2-204ENST00000518756 FRRS1LQ9P0K9 344 aa8.26□□□□□ -1.09
HDAC2-204ENST00000518756 USP20Q9Y2K6 914 aa8.26□□□□□ -1.09
HDAC2-204ENST00000518756 ZBTB42B2RXF5 422 aa8.25□□□□□ -1.09
HDAC2-204ENST00000518756 GPLD1P80108 840 aa8.25□□□□□ -1.09
HDAC2-204ENST00000518756 HFE2Q6ZVN8 426 aa8.25□□□□□ -1.09
HDAC2-204ENST00000518756 DTWD1Q8N5C7 304 aa8.25□□□□□ -1.09
HDAC2-204ENST00000518756 TRPM4Q8TD43 1214 aa8.25□□□□□ -1.09
HDAC2-204ENST00000518756 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
HDAC2-204ENST00000518756 PTCD1O75127 700 aaKnown RBP8.24□□□□□ -1.09
HDAC2-204ENST00000518756 GRIK5Q16478 980 aa8.24□□□□□ -1.09
HDAC2-204ENST00000518756 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
HDAC2-204ENST00000518756 RTCBQ9Y3I0 505 aaKnown RBP8.24□□□□□ -1.09
HDAC2-204ENST00000518756 IREB2P48200 963 aaKnown RBP8.23□□□□□ -1.09
HDAC2-204ENST00000518756 RGL4Q8IZJ4 473 aa8.23□□□□□ -1.09
HDAC2-204ENST00000518756 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
HDAC2-204ENST00000518756 LRFN2Q9ULH4 789 aa8.23□□□□□ -1.09
HDAC2-204ENST00000518756 ATP2B4P23634 1241 aa8.22□□□□□ -1.09
HDAC2-204ENST00000518756 LRP8Q14114 963 aa8.22□□□□□ -1.09
HDAC2-204ENST00000518756 COX20Q5RI15 118 aa8.22□□□□□ -1.09
HDAC2-204ENST00000518756 C16orf46Q6P387 395 aa8.22□□□□□ -1.09
HDAC2-204ENST00000518756 SSBP4Q9BWG4 385 aaPredicted RBP8.22□□□□□ -1.09
HDAC2-204ENST00000518756 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
HDAC2-204ENST00000518756 XYLBO75191 536 aa8.21□□□□□ -1.1
HDAC2-204ENST00000518756 NOS3P29474 1203 aa8.21□□□□□ -1.1
HDAC2-204ENST00000518756 NRLP54845 237 aa8.21□□□□□ -1.1
HDAC2-204ENST00000518756 ILDR2Q71H61 639 aa8.21□□□□□ -1.1
HDAC2-204ENST00000518756 TREML1Q86YW5 311 aa8.21□□□□□ -1.1
HDAC2-204ENST00000518756 CMTR1Q8N1G2 835 aaKnown RBP8.21□□□□□ -1.1
HDAC2-204ENST00000518756 NSUN5Q96P11 429 aaKnown RBP8.21□□□□□ -1.1
HDAC2-204ENST00000518756 MKNK1Q9BUB5 465 aa8.21□□□□□ -1.1
HDAC2-204ENST00000518756 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms