RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 NEFMP07197 916 aa11.82□□□□□ -0.52
PVT1-207ENST00000518528 U2AF1L5P0DN76 240 aaPredicted RBP11.82□□□□□ -0.52
PVT1-207ENST00000518528 U2AF1Q01081 240 aaKnown RBP eCLIP11.82□□□□□ -0.52
PVT1-207ENST00000518528 DPF2Q92785 391 aa11.82□□□□□ -0.52
PVT1-207ENST00000518528 ZIC5Q96T25 663 aa11.82□□□□□ -0.52
PVT1-207ENST00000518528 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
PVT1-207ENST00000518528 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
PVT1-207ENST00000518528 RNF186Q9NXI6 227 aa11.82□□□□□ -0.52
PVT1-207ENST00000518528 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
PVT1-207ENST00000518528 NTSR2O95665 410 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 MYL6BP14649 208 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
PVT1-207ENST00000518528 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
PVT1-207ENST00000518528 TTLL7Q6ZT98 887 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 DDX46Q7L014 1031 aaKnown RBP11.81□□□□□ -0.52
PVT1-207ENST00000518528 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 ZNF34Q8IZ26 560 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 HDAC9Q9UKV0 1011 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
PVT1-207ENST00000518528 CASP8AP2Q9UKL3 1982 aa11.8□□□□□ -0.52
PVT1-207ENST00000518528 FAM155AB1AL88 458 aaPredicted RBP11.8□□□□□ -0.52
PVT1-207ENST00000518528 RPS12P25398 132 aaKnown RBP11.8□□□□□ -0.52
PVT1-207ENST00000518528 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
PVT1-207ENST00000518528 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
PVT1-207ENST00000518528 SLC10A5Q5PT55 438 aa11.8□□□□□ -0.52
PVT1-207ENST00000518528 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
PVT1-207ENST00000518528 TRPM7Q96QT4 1865 aa11.8□□□□□ -0.52
PVT1-207ENST00000518528 ABCC4O15439 1325 aa11.8□□□□□ -0.52
PVT1-207ENST00000518528 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
PVT1-207ENST00000518528 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
PVT1-207ENST00000518528 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
PVT1-207ENST00000518528 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
PVT1-207ENST00000518528 ERBB4Q15303 1308 aa11.79□□□□□ -0.52
PVT1-207ENST00000518528 SLC10A3P09131 477 aa11.78□□□□□ -0.52
PVT1-207ENST00000518528 GRAPQ13588 217 aa11.78□□□□□ -0.52
PVT1-207ENST00000518528 TBC1D10BQ4KMP7 808 aaPredicted RBP11.78□□□□□ -0.52
PVT1-207ENST00000518528 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
PVT1-207ENST00000518528 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
PVT1-207ENST00000518528 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
PVT1-207ENST00000518528 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
PVT1-207ENST00000518528 WASHC4Q2M389 1173 aa11.77□□□□□ -0.53
PVT1-207ENST00000518528 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
PVT1-207ENST00000518528 SLC51AQ86UW1 340 aa11.77□□□□□ -0.53
PVT1-207ENST00000518528 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
PVT1-207ENST00000518528 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
PVT1-207ENST00000518528 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
PVT1-207ENST00000518528 YDJCA8MPS7 323 aa11.76□□□□□ -0.53
PVT1-207ENST00000518528 ADM5C9JUS6 153 aa11.76□□□□□ -0.53
PVT1-207ENST00000518528 PSMD14O00487 310 aa11.76□□□□□ -0.53
PVT1-207ENST00000518528 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
PVT1-207ENST00000518528 FKBP1BP68106 108 aa11.76□□□□□ -0.53
PVT1-207ENST00000518528 EYA3Q99504 573 aa11.76□□□□□ -0.53
PVT1-207ENST00000518528 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
PVT1-207ENST00000518528 G3V3G9 751 aa11.75□□□□□ -0.53
PVT1-207ENST00000518528 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
PVT1-207ENST00000518528 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
PVT1-207ENST00000518528 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
PVT1-207ENST00000518528 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
PVT1-207ENST00000518528 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
PVT1-207ENST00000518528 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
PVT1-207ENST00000518528 DBNDD1Q9H9R9 158 aa11.74□□□□□ -0.53
PVT1-207ENST00000518528 GGA3Q9NZ52 723 aa11.74□□□□□ -0.53
PVT1-207ENST00000518528 NSFL1CQ9UNZ2 370 aaKnown RBP11.74□□□□□ -0.53
PVT1-207ENST00000518528 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
PVT1-207ENST00000518528 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
PVT1-207ENST00000518528 RASAL3Q86YV0 1011 aa11.73□□□□□ -0.53
PVT1-207ENST00000518528 ZNF296Q8WUU4 475 aaPredicted RBP11.73□□□□□ -0.53
PVT1-207ENST00000518528 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
PVT1-207ENST00000518528 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
PVT1-207ENST00000518528 ECE2O60344 883 aa11.72□□□□□ -0.53
PVT1-207ENST00000518528 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
PVT1-207ENST00000518528 NLRP10Q86W26 655 aa11.72□□□□□ -0.53
PVT1-207ENST00000518528 ZC3H12CQ9C0D7 883 aaKnown RBP11.72□□□□□ -0.53
PVT1-207ENST00000518528 TBC1D8O95759 1140 aa11.71□□□□□ -0.53
PVT1-207ENST00000518528 EGFRP00533 1210 aa11.71□□□□□ -0.53
PVT1-207ENST00000518528 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
PVT1-207ENST00000518528 HABP4Q5JVS0 413 aaKnown RBP11.71□□□□□ -0.53
PVT1-207ENST00000518528 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
PVT1-207ENST00000518528 PNNQ9H307 717 aaKnown RBP11.71□□□□□ -0.53
PVT1-207ENST00000518528 TNRC18O15417 2968 aaPredicted RBP11.7□□□□□ -0.54
PVT1-207ENST00000518528 GPR25O00155 361 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 FKTNO75072 461 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 VIL1P09327 827 aaKnown RBP11.7□□□□□ -0.54
PVT1-207ENST00000518528 NF2P35240 595 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 SREBF2Q12772 1141 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 TCIRG1Q13488 830 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 SCARF1Q14162 830 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
PVT1-207ENST00000518528 DOK7Q18PE1 504 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
PVT1-207ENST00000518528 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
PVT1-207ENST00000518528 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
PVT1-207ENST00000518528 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
PVT1-207ENST00000518528 INTS3Q68E01 1043 aaKnown RBP11.69□□□□□ -0.54
PVT1-207ENST00000518528 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
PVT1-207ENST00000518528 POLLQ9UGP5 575 aa11.69□□□□□ -0.54
PVT1-207ENST00000518528 PITPNM2Q9BZ72 1349 aa11.68□□□□□ -0.54
PVT1-207ENST00000518528 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
PVT1-207ENST00000518528 PPP2R1AP30153 589 aa11.68□□□□□ -0.54
PVT1-207ENST00000518528 TM4SF4P48230 202 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms