RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 FAM89AQ96GI7 184 aa13.86□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 RNF123Q5XPI4 1314 aa13.86□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 KLRG2A4D1S0 409 aaPredicted RBP13.85□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 OLFM4Q6UX06 510 aa13.85□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 METTL22Q9BUU2 404 aaPredicted RBP13.85□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 CWF19L2Q2TBE0 894 aaKnown RBP13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 CWC25Q9NXE8 425 aaPredicted RBP13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
CTD-2270F17.1-201ENST00000518387 NFKBIEO00221 500 aa13.83□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 SLC51AQ86UW1 340 aa13.83□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 F6X3S4 739 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 ALDH1B1P30837 517 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 CCDC93Q567U6 631 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 SLC10A5Q5PT55 438 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 DNAAF4Q8WXU2 420 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 ABCC4O15439 1325 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 COL4A1P02462 1669 aa13.82□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 PPEF1O14829 653 aaPredicted RBP13.81□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 PRELPP51888 382 aa13.81□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 TRIM28Q13263 835 aaKnown RBP13.81□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 HOXA10P31260 410 aaPredicted RBP13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 LRRC37AA6NMS7 1700 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 PCCAP05165 728 aaPredicted RBP13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 LMNB1P20700 586 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 CRAMP1Q96RY5 1269 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 TRMT2AQ8IZ69 625 aaKnown RBP13.78□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 GPBP1L1Q9HC44 474 aaPredicted RBP13.78□□□□□ -0.2
CTD-2270F17.1-201ENST00000518387 PDE8AO60658 829 aa13.77□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 GRAPQ13588 217 aa13.77□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 GRAPLQ8TC17 118 aaPredicted RBP13.77□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 SNED1Q8TER0 1413 aa13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CDHR2Q9BYE9 1310 aa13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 GCKRQ14397 625 aa13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 RTKN2Q8IZC4 609 aa13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CELF1Q92879 486 aaKnown RBP13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 TMX4Q9H1E5 349 aaPredicted RBP13.76□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 HSP90B1P14625 803 aaKnown RBP13.75□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 SEC31BQ9NQW1 1179 aa13.75□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CTSWP56202 376 aa13.74□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 COL4A5P29400 1685 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 PTPRCP08575 1304 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 H7C1W4 665 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 BBOX1O75936 387 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 IARSP41252 1262 aaKnown RBP13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CC2D2BQ6DHV5 1058 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 NMRK2Q9NPI5 230 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 DUOX1Q9NRD9 1551 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 PSMD1Q99460 953 aa13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 GREM2Q9H772 168 aa13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 A0A1B0GUL6 1792 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 KDM2BQ8NHM5 1336 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 RARSP54136 660 aaKnown RBP13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 CASP7P55210 303 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 SP8Q8IXZ3 490 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 MPNDQ8N594 471 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
CTD-2270F17.1-201ENST00000518387 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms