RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 TNS2Q63HR2 1409 aa8.19□□□□□ -1.1
MRPS28-203ENST00000518371 TRIM66O15016 1216 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 U2SURPO15042 1029 aaKnown RBP8.18□□□□□ -1.1
MRPS28-203ENST00000518371 NDUFV2P19404 249 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 PPP2R1AP30153 589 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 GSK3AP49840 483 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 PLEKHO1Q53GL0 409 aaPredicted RBP8.18□□□□□ -1.1
MRPS28-203ENST00000518371 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 CAMKK2Q96RR4 588 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
MRPS28-203ENST00000518371 PEAK1Q9H792 1746 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 PLSCR1O15162 318 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 FDX1P10109 184 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 AMOTQ4VCS5 1084 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 GIGYF2Q6Y7W6 1299 aaKnown RBP8.17□□□□□ -1.1
MRPS28-203ENST00000518371 AEBP1Q8IUX7 1158 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 IFNL2Q8IZJ0 200 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 CCDC24Q8N4L8 307 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 NUDCQ9Y266 331 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 BCL9O00512 1426 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 MEGF6O75095 1541 aa8.17□□□□□ -1.1
MRPS28-203ENST00000518371 PARP4Q9UKK3 1724 aaKnown RBP8.17□□□□□ -1.1
MRPS28-203ENST00000518371 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
MRPS28-203ENST00000518371 MOXD2PA6NHM9 499 aa8.16□□□□□ -1.1
MRPS28-203ENST00000518371 CYP27B1O15528 508 aa8.16□□□□□ -1.1
MRPS28-203ENST00000518371 HMOX1P09601 288 aa8.16□□□□□ -1.1
MRPS28-203ENST00000518371 TRIM46Q7Z4K8 759 aa8.16□□□□□ -1.1
MRPS28-203ENST00000518371 PARP9Q8IXQ6 854 aa8.16□□□□□ -1.1
MRPS28-203ENST00000518371 ANKRD26Q9UPS8 1709 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 LRRC37A3O60309 1634 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 JUNDP17535 347 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 RALBP1Q15311 655 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 C1orf141Q5JVX7 400 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
MRPS28-203ENST00000518371 ZNF530Q6P9A1 599 aaPredicted RBP8.15□□□□□ -1.1
MRPS28-203ENST00000518371 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 AK7Q96M32 723 aa8.15□□□□□ -1.1
MRPS28-203ENST00000518371 FAM208AQ9UK61 1670 aaKnown RBP8.14□□□□□ -1.11
MRPS28-203ENST00000518371 PARD3Q8TEW0 1356 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
MRPS28-203ENST00000518371 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
MRPS28-203ENST00000518371 MS4A1P11836 297 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 BMP1P13497 986 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 PHKG2P15735 406 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 SKOR1P84550 965 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.11
MRPS28-203ENST00000518371 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 PTCRAQ6ISU1 281 aaPredicted RBP8.14□□□□□ -1.11
MRPS28-203ENST00000518371 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
MRPS28-203ENST00000518371 NCAPD2Q15021 1401 aa8.13□□□□□ -1.11
MRPS28-203ENST00000518371 RGPD2P0DJD1 1756 aa8.13□□□□□ -1.11
MRPS28-203ENST00000518371 C6orf229H3BNL8 230 aa8.13□□□□□ -1.11
MRPS28-203ENST00000518371 R3HDM1Q15032 1099 aaKnown RBP8.13□□□□□ -1.11
MRPS28-203ENST00000518371 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
MRPS28-203ENST00000518371 BEGAINQ9BUH8 593 aa8.13□□□□□ -1.11
MRPS28-203ENST00000518371 KAT6BQ8WYB5 2073 aa8.12□□□□□ -1.11
MRPS28-203ENST00000518371 RGPD1P0DJD0 1748 aa8.12□□□□□ -1.11
MRPS28-203ENST00000518371 ALDH1A1P00352 501 aa8.12□□□□□ -1.11
MRPS28-203ENST00000518371 DCAF5Q96JK2 942 aa8.12□□□□□ -1.11
MRPS28-203ENST00000518371 STK32BQ9NY57 414 aa8.12□□□□□ -1.11
MRPS28-203ENST00000518371 TMOD3Q9NYL9 352 aa8.12□□□□□ -1.11
MRPS28-203ENST00000518371 WNK3Q9BYP7 1800 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 ERVV-2B6SEH9 535 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
MRPS28-203ENST00000518371 NEFMP07197 916 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 PRKAR2BP31323 418 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 CABP4P57796 275 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 MTHFSDQ2M296 383 aaKnown RBP8.11□□□□□ -1.11
MRPS28-203ENST00000518371 AKAP4Q5JQC9 854 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 PIGBQ92521 554 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 SMARCC1Q92922 1105 aaPredicted RBP8.11□□□□□ -1.11
MRPS28-203ENST00000518371 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 TBC1D2Q9BYX2 928 aa8.11□□□□□ -1.11
MRPS28-203ENST00000518371 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
MRPS28-203ENST00000518371 KDRP35968 1356 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 PLEKHG2Q9H7P9 1386 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 MYBBP1AQ9BQG0 1328 aaKnown RBP8.1□□□□□ -1.11
MRPS28-203ENST00000518371 GDF11O95390 407 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
MRPS28-203ENST00000518371 GJA5P36382 358 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 KCNQ4P56696 695 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 SLC27A3Q5K4L6 730 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 GAS2L2Q8NHY3 880 aa8.1□□□□□ -1.11
MRPS28-203ENST00000518371 WNT7BP56706 349 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 RASSF7Q02833 373 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 NFATC2IPQ8NCF5 419 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 PNNQ9H307 717 aaKnown RBP8.09□□□□□ -1.11
MRPS28-203ENST00000518371 PRKRIP1Q9H875 184 aaPredicted RBP8.09□□□□□ -1.11
MRPS28-203ENST00000518371 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.11
MRPS28-203ENST00000518371 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
MRPS28-203ENST00000518371 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
MRPS28-203ENST00000518371 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms