RNA–Protein interactions for RNA: ENST00000517744.1

IGKV1-35-201, Transcript of immunoglobulin kappa variable 1-35 (pseudogene), humanhuman

BASIC

Gene IGKV1-35, Length 285 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-35-201ENST00000517744 SUCLG2Q96I99 432 aa13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 SYT17Q9BSW7 474 aa13.66□□□□□ -0.22
IGKV1-35-201ENST00000517744 CCDC152Q4G0S7 254 aa13.65□□□□□ -0.22
IGKV1-35-201ENST00000517744 C3orf67Q6ZVT6 689 aa13.65□□□□□ -0.22
IGKV1-35-201ENST00000517744 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.22
IGKV1-35-201ENST00000517744 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
IGKV1-35-201ENST00000517744 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
IGKV1-35-201ENST00000517744 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
IGKV1-35-201ENST00000517744 GNAI2P04899 355 aa13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 DPEP1P16444 411 aa13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 AAMPQ13685 434 aa13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
IGKV1-35-201ENST00000517744 A0A0G2JLW4 131 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 CHRNA5P30532 468 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 MTX1Q13505 466 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 ANKRD44Q8N8A2 993 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 BICC1Q9H694 974 aaKnown RBP13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
IGKV1-35-201ENST00000517744 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
IGKV1-35-201ENST00000517744 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
IGKV1-35-201ENST00000517744 PIM2Q9P1W9 311 aa13.62□□□□□ -0.23
IGKV1-35-201ENST00000517744 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
IGKV1-35-201ENST00000517744 GRAPQ13588 217 aa13.61□□□□□ -0.23
IGKV1-35-201ENST00000517744 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
IGKV1-35-201ENST00000517744 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
IGKV1-35-201ENST00000517744 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
IGKV1-35-201ENST00000517744 CRBNQ96SW2 442 aa13.61□□□□□ -0.23
IGKV1-35-201ENST00000517744 GREM2Q9H772 168 aa13.61□□□□□ -0.23
IGKV1-35-201ENST00000517744 BBOX1O75936 387 aa13.6□□□□□ -0.23
IGKV1-35-201ENST00000517744 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
IGKV1-35-201ENST00000517744 CDC5LQ99459 802 aaKnown RBP13.6□□□□□ -0.23
IGKV1-35-201ENST00000517744 ANKRD18BA2A2Z9 1011 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 ITGA6P23229 1130 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 RPS8P62241 208 aaKnown RBP13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 CCDC57Q2TAC2 916 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 DALRD3Q5D0E6 543 aaKnown RBP13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 RPAP2Q8IXW5 612 aaPredicted RBP13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
IGKV1-35-201ENST00000517744 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
IGKV1-35-201ENST00000517744 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
IGKV1-35-201ENST00000517744 PRPF40BQ6NWY9 871 aaKnown RBP13.58□□□□□ -0.24
IGKV1-35-201ENST00000517744 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
IGKV1-35-201ENST00000517744 CELF1Q92879 486 aaKnown RBP13.58□□□□□ -0.24
IGKV1-35-201ENST00000517744 LRRC37AA6NMS7 1700 aa13.58□□□□□ -0.24
IGKV1-35-201ENST00000517744 COL4A1P02462 1669 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 POLA2Q14181 598 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 CEP85Q6P2H3 762 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 ANKRD18AQ8IVF6 992 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 SP8Q8IXZ3 490 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 SSH3Q8TE77 659 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 CCDC85AQ96PX6 553 aaPredicted RBP13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
IGKV1-35-201ENST00000517744 SRGAP3O43295 1099 aa13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 PTPN12Q05209 780 aaKnown RBP13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 SOGA3Q5TF21 947 aa13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 COPRSQ9NQ92 184 aa13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 TAF1P21675 1872 aa13.56□□□□□ -0.24
IGKV1-35-201ENST00000517744 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
IGKV1-35-201ENST00000517744 PNMA6EA0A0J9YXQ4 647 aa13.55□□□□□ -0.24
IGKV1-35-201ENST00000517744 EXOC6Q8TAG9 804 aa13.55□□□□□ -0.24
IGKV1-35-201ENST00000517744 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
IGKV1-35-201ENST00000517744 HMMRO75330 724 aa13.54□□□□□ -0.24
IGKV1-35-201ENST00000517744 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
IGKV1-35-201ENST00000517744 MPHOSPH8Q99549 860 aa13.54□□□□□ -0.24
IGKV1-35-201ENST00000517744 BCS1LQ9Y276 419 aa13.54□□□□□ -0.24
IGKV1-35-201ENST00000517744 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 CIAO1O76071 339 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 SIRT2Q8IXJ6 389 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 RTKN2Q8IZC4 609 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 TMX4Q9H1E5 349 aaPredicted RBP13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 MINPP1Q9UNW1 487 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 RIPOR2Q9Y4F9 1068 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 LTBP1Q14766 1721 aa13.53□□□□□ -0.24
IGKV1-35-201ENST00000517744 EYA2O00167 538 aa13.52□□□□□ -0.25
IGKV1-35-201ENST00000517744 C21orf2O43822 256 aa13.52□□□□□ -0.25
IGKV1-35-201ENST00000517744 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms