RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PUS3Q9BZE2 481 aaKnown RBP32.05■■■□□ 2.72
COL13A1-210ENST00000517713 FBXO3Q9UK99 471 aa32.05■■■□□ 2.72
COL13A1-210ENST00000517713 HAUS7Q99871 368 aa32.05■■■□□ 2.72
COL13A1-210ENST00000517713 SNRKQ9NRH2 765 aa32.05■■■□□ 2.72
COL13A1-210ENST00000517713 CRKLP46109 303 aaKnown RBP32.04■■■□□ 2.72
COL13A1-210ENST00000517713 SYNE4Q8N205 404 aa32.04■■■□□ 2.72
COL13A1-210ENST00000517713 EDC3Q96F86 508 aaKnown RBP32.04■■■□□ 2.72
COL13A1-210ENST00000517713 CWC22Q9HCG8 908 aaKnown RBP32.04■■■□□ 2.72
COL13A1-210ENST00000517713 UPF3BQ9BZI7 483 aaKnown RBP32.04■■■□□ 2.72
COL13A1-210ENST00000517713 PALLDQ8WX93 1383 aa32.04■■■□□ 2.72
COL13A1-210ENST00000517713 TIMM10P62072 90 aa32.03■■■□□ 2.72
COL13A1-210ENST00000517713 SMARCC1Q92922 1105 aaPredicted RBP32.03■■■□□ 2.72
COL13A1-210ENST00000517713 ZNF609O15014 1411 aa32.03■■■□□ 2.72
COL13A1-210ENST00000517713 CCDC171Q6TFL3 1326 aa32.03■■■□□ 2.72
COL13A1-210ENST00000517713 IFIT5Q13325 482 aaKnown RBP32.02■■■□□ 2.72
COL13A1-210ENST00000517713 GSE1Q14687 1217 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 TMX3Q96JJ7 454 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 CCDC85AQ96PX6 553 aaPredicted RBP32.02■■■□□ 2.72
COL13A1-210ENST00000517713 CEP126Q9P2H0 1117 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 TRMT112Q9UI30 125 aaKnown RBP32.02■■■□□ 2.72
COL13A1-210ENST00000517713 CICQ96RK0 1608 aaPredicted RBP32.02■■■□□ 2.72
COL13A1-210ENST00000517713 A0A0D9SFI3 127 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 ITPK1Q13572 414 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 ZNF34Q8IZ26 560 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 RASEFQ8IZ41 740 aa32.02■■■□□ 2.72
COL13A1-210ENST00000517713 DNAJC2Q99543 621 aaKnown RBP32.02■■■□□ 2.72
COL13A1-210ENST00000517713 KCNQ2O43526 872 aa32.01■■■□□ 2.71
COL13A1-210ENST00000517713 TAF7LQ5H9L4 462 aa32.01■■■□□ 2.71
COL13A1-210ENST00000517713 RREB1Q92766 1687 aa32.01■■■□□ 2.71
COL13A1-210ENST00000517713 FNBP4Q8N3X1 1017 aaPredicted RBP32■■■□□ 2.71
COL13A1-210ENST00000517713 RFX7Q2KHR2 1363 aa31.99■■■□□ 2.71
COL13A1-210ENST00000517713 IRS4O14654 1257 aaPredicted RBP31.99■■■□□ 2.71
COL13A1-210ENST00000517713 TTLL11Q8NHH1 800 aa31.99■■■□□ 2.71
COL13A1-210ENST00000517713 NDUFB9Q9Y6M9 179 aa31.99■■■□□ 2.71
COL13A1-210ENST00000517713 A0A1B0GUL7 405 aa31.99■■■□□ 2.71
COL13A1-210ENST00000517713 CTSWP56202 376 aa31.99■■■□□ 2.71
COL13A1-210ENST00000517713 KCNB2Q92953 911 aa31.99■■■□□ 2.71
COL13A1-210ENST00000517713 UBN2Q6ZU65 1347 aa31.98■■■□□ 2.71
COL13A1-210ENST00000517713 ZGPATQ8N5A5 531 aaKnown RBP31.98■■■□□ 2.71
COL13A1-210ENST00000517713 MAP4K1Q92918 833 aa31.98■■■□□ 2.71
COL13A1-210ENST00000517713 MED23Q9ULK4 1368 aa31.98■■■□□ 2.71
COL13A1-210ENST00000517713 NECTIN1Q15223 517 aa31.97■■■□□ 2.71
COL13A1-210ENST00000517713 PRPF40BQ6NWY9 871 aaKnown RBP31.97■■■□□ 2.71
COL13A1-210ENST00000517713 GBP4Q96PP9 640 aa31.97■■■□□ 2.71
COL13A1-210ENST00000517713 NUCB2P80303 420 aa31.97■■■□□ 2.71
COL13A1-210ENST00000517713 AKAP2Q9Y2D5 859 aa31.97■■■□□ 2.71
COL13A1-210ENST00000517713 CUL4AQ13619 759 aa31.96■■■□□ 2.71
COL13A1-210ENST00000517713 RBM8AQ9Y5S9 174 aaKnown RBP31.96■■■□□ 2.71
COL13A1-210ENST00000517713 DDX11L8A8MPP1 907 aa31.95■■■□□ 2.71
COL13A1-210ENST00000517713 PDE8AO60658 829 aa31.95■■■□□ 2.71
COL13A1-210ENST00000517713 SSFA2P28290 1259 aa31.95■■■□□ 2.71
COL13A1-210ENST00000517713 GREM2Q9H772 168 aa31.95■■■□□ 2.71
COL13A1-210ENST00000517713 SPATA31A6Q5VVP1 1343 aa31.95■■■□□ 2.71
COL13A1-210ENST00000517713 MYH3P11055 1940 aa31.95■■■□□ 2.7
COL13A1-210ENST00000517713 ITGA6P23229 1130 aa31.95■■■□□ 2.7
COL13A1-210ENST00000517713 NOL8Q76FK4 1167 aaKnown RBP31.95■■■□□ 2.7
COL13A1-210ENST00000517713 KCNJ4P48050 445 aa31.94■■■□□ 2.7
COL13A1-210ENST00000517713 DDX46Q7L014 1031 aaKnown RBP31.94■■■□□ 2.7
COL13A1-210ENST00000517713 ANKRD18BA2A2Z9 1011 aa31.93■■■□□ 2.7
COL13A1-210ENST00000517713 KBTBD3Q8NAB2 608 aa31.93■■■□□ 2.7
COL13A1-210ENST00000517713 TTC14Q96N46 770 aa31.93■■■□□ 2.7
COL13A1-210ENST00000517713 PAG1Q9NWQ8 432 aa31.93■■■□□ 2.7
COL13A1-210ENST00000517713 CAMTA2O94983 1202 aa31.92■■■□□ 2.7
COL13A1-210ENST00000517713 ZNF589Q86UQ0 364 aaPredicted RBP31.92■■■□□ 2.7
COL13A1-210ENST00000517713 USP21Q9UK80 565 aa31.92■■■□□ 2.7
COL13A1-210ENST00000517713 MYH14Q7Z406 1995 aaKnown RBP31.92■■■□□ 2.7
COL13A1-210ENST00000517713 ZKSCAN1P17029 563 aaPredicted RBP31.92■■■□□ 2.7
COL13A1-210ENST00000517713 CREB3L3Q68CJ9 461 aa31.92■■■□□ 2.7
COL13A1-210ENST00000517713 IFIT1P09914 478 aaKnown RBP31.91■■■□□ 2.7
COL13A1-210ENST00000517713 CASTP20810 708 aaKnown RBP31.91■■■□□ 2.7
COL13A1-210ENST00000517713 LDHAL6AQ6ZMR3 332 aa31.91■■■□□ 2.7
COL13A1-210ENST00000517713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.91■■■□□ 2.7
COL13A1-210ENST00000517713 INTS4Q96HW7 963 aaKnown RBP31.91■■■□□ 2.7
COL13A1-210ENST00000517713 TM6SF1Q9BZW5 370 aa31.91■■■□□ 2.7
COL13A1-210ENST00000517713 RIPOR2Q9Y4F9 1068 aa31.91■■■□□ 2.7
COL13A1-210ENST00000517713 GOLIM4O00461 696 aa31.9■■■□□ 2.7
COL13A1-210ENST00000517713 SUSD4Q5VX71 490 aa31.9■■■□□ 2.7
COL13A1-210ENST00000517713 AK7Q96M32 723 aa31.9■■■□□ 2.7
COL13A1-210ENST00000517713 ZNF831Q5JPB2 1677 aa31.9■■■□□ 2.7
COL13A1-210ENST00000517713 CYP2E1P05181 493 aaPredicted RBP31.9■■■□□ 2.7
COL13A1-210ENST00000517713 COL5A3P25940 1745 aaPredicted RBP31.9■■■□□ 2.7
COL13A1-210ENST00000517713 CLEC17AQ6ZS10 378 aa31.89■■■□□ 2.7
COL13A1-210ENST00000517713 TICAM2Q86XR7 235 aa31.89■■■□□ 2.7
COL13A1-210ENST00000517713 JAKMIP1Q96N16 626 aaKnown RBP31.89■■■□□ 2.7
COL13A1-210ENST00000517713 TAF5LO75529 589 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 ADCK5Q3MIX3 580 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 CCDC158Q5M9N0 1113 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 XAGE2Q96GT9 111 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 SLC27A2O14975 620 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 METTL24Q5JXM2 366 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 GORABQ5T7V8 394 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 ZSWIM6Q9HCJ5 1215 aa31.88■■■□□ 2.69
COL13A1-210ENST00000517713 SH3TC1Q8TE82 1336 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 RIC1Q4ADV7 1423 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 AK2P54819 239 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 MCMDC2Q4G0Z9 681 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 PARP10Q53GL7 1025 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 RNF20Q5VTR2 975 aa31.87■■■□□ 2.69
COL13A1-210ENST00000517713 UTP14AQ9BVJ6 771 aaKnown RBP31.87■■■□□ 2.69
COL13A1-210ENST00000517713 ADORA1P30542 326 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms