RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 PDE8AO60658 829 aa18.01■□□□□ 0.47
PDGFRB-202ENST00000517488 DDNO94850 711 aaPredicted RBP18.01■□□□□ 0.47
PDGFRB-202ENST00000517488 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
PDGFRB-202ENST00000517488 TMX4Q9H1E5 349 aaPredicted RBP18.01■□□□□ 0.47
PDGFRB-202ENST00000517488 ZNF541Q9H0D2 1346 aa18■□□□□ 0.47
PDGFRB-202ENST00000517488 F6X3S4 739 aa18■□□□□ 0.47
PDGFRB-202ENST00000517488 HSP90B1P14625 803 aaKnown RBP18■□□□□ 0.47
PDGFRB-202ENST00000517488 VEGFAP15692 232 aaPredicted RBP18■□□□□ 0.47
PDGFRB-202ENST00000517488 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
PDGFRB-202ENST00000517488 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
PDGFRB-202ENST00000517488 FZD9O00144 591 aa17.99■□□□□ 0.47
PDGFRB-202ENST00000517488 DPP8Q6V1X1 898 aaPredicted RBP17.99■□□□□ 0.47
PDGFRB-202ENST00000517488 C16orf71Q8IYS4 520 aaPredicted RBP17.99■□□□□ 0.47
PDGFRB-202ENST00000517488 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 H7C1W4 665 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 GCKRQ14397 625 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 LARGE2Q8N3Y3 721 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 MPNDQ8N594 471 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 RBM46Q8TBY0 533 aaKnown RBP17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 RTFDC1Q9BY42 306 aaPredicted RBP17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
PDGFRB-202ENST00000517488 CCDC88AQ3V6T2 1871 aa17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 LAMB2P55268 1798 aa17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 COL4A5P29400 1685 aa17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 PPIP5K2O43314 1243 aa17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
PDGFRB-202ENST00000517488 COL4A1P02462 1669 aa17.96■□□□□ 0.47
PDGFRB-202ENST00000517488 CASP7P55210 303 aa17.96■□□□□ 0.47
PDGFRB-202ENST00000517488 CTSWP56202 376 aa17.96■□□□□ 0.47
PDGFRB-202ENST00000517488 AOC3Q16853 763 aa17.96■□□□□ 0.47
PDGFRB-202ENST00000517488 BEND3Q5T5X7 828 aa17.96■□□□□ 0.47
PDGFRB-202ENST00000517488 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
PDGFRB-202ENST00000517488 HSPA6P17066 643 aa17.95■□□□□ 0.46
PDGFRB-202ENST00000517488 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
PDGFRB-202ENST00000517488 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
PDGFRB-202ENST00000517488 GPSM2P81274 684 aa17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 L3MBTL3Q96JM7 780 aaPredicted RBP17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 GREM2Q9H772 168 aa17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 NSFL1CQ9UNZ2 370 aaKnown RBP17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 CEP350Q5VT06 3117 aa17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 DICER1Q9UPY3 1922 aaKnown RBP17.94■□□□□ 0.46
PDGFRB-202ENST00000517488 EIF6P56537 245 aaKnown RBP17.93■□□□□ 0.46
PDGFRB-202ENST00000517488 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
PDGFRB-202ENST00000517488 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
PDGFRB-202ENST00000517488 TAF1P21675 1872 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 FSTL1Q12841 308 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 GPC2Q8N158 579 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 WDR90Q96KV7 1748 aa17.92■□□□□ 0.46
PDGFRB-202ENST00000517488 POTEIP0CG38 1075 aa17.91■□□□□ 0.46
PDGFRB-202ENST00000517488 POTEJP0CG39 1038 aa17.91■□□□□ 0.46
PDGFRB-202ENST00000517488 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
PDGFRB-202ENST00000517488 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
PDGFRB-202ENST00000517488 TAF1DQ9H5J8 278 aaPredicted RBP17.91■□□□□ 0.46
PDGFRB-202ENST00000517488 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
PDGFRB-202ENST00000517488 IQCA1LA6NCM1 817 aa17.9■□□□□ 0.46
PDGFRB-202ENST00000517488 C6orf229H3BNL8 230 aa17.9■□□□□ 0.46
PDGFRB-202ENST00000517488 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
PDGFRB-202ENST00000517488 GPR101Q96P66 508 aaPredicted RBP17.9■□□□□ 0.46
PDGFRB-202ENST00000517488 DUOX1Q9NRD9 1551 aa17.9■□□□□ 0.46
PDGFRB-202ENST00000517488 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
PDGFRB-202ENST00000517488 CSF1RP07333 972 aa17.89■□□□□ 0.45
PDGFRB-202ENST00000517488 CXCL9Q07325 125 aa17.89■□□□□ 0.45
PDGFRB-202ENST00000517488 FAM161AQ3B820 660 aa17.89■□□□□ 0.45
PDGFRB-202ENST00000517488 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
PDGFRB-202ENST00000517488 PODXL2Q9NZ53 605 aa17.89■□□□□ 0.45
PDGFRB-202ENST00000517488 HACL1Q9UJ83 578 aa17.89■□□□□ 0.45
PDGFRB-202ENST00000517488 GRM8O00222 908 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 RIMBP2O15034 1052 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 ALDH1L1O75891 902 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 WASHC4Q2M389 1173 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 ALDH1L2Q3SY69 923 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 ANKIB1Q9P2G1 1089 aa17.88■□□□□ 0.45
PDGFRB-202ENST00000517488 YDJCA8MPS7 323 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 RAD17O75943 681 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 UFL1O94874 794 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 ITGA6P23229 1130 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 SCNN1DP51172 638 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 FOXO4P98177 505 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 EPHA10Q5JZY3 1008 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 SMC4Q9NTJ3 1288 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 BSDC1Q9NW68 430 aaPredicted RBP17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 GGA1Q9UJY5 639 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 CACNA1FO60840 1977 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 PTPRCP08575 1304 aa17.87■□□□□ 0.45
PDGFRB-202ENST00000517488 EPHX2P34913 555 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms