RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 DSC3Q14574 896 aa8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 XKR5Q6UX68 686 aa8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
RNU6-1028P-201ENST00000517164 TNFRSF21O75509 655 aa8.17□□□□□ -1.1
RNU6-1028P-201ENST00000517164 RARAP10276 462 aa8.17□□□□□ -1.1
RNU6-1028P-201ENST00000517164 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
RNU6-1028P-201ENST00000517164 ABI2Q9NYB9 513 aaPredicted RBP8.17□□□□□ -1.1
RNU6-1028P-201ENST00000517164 MMP20O60882 483 aa8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 IGF1RP08069 1367 aa8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 ERCC3P19447 782 aa8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 FMR1Q06787 632 aaKnown RBP eCLIP8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 ORC1Q13415 861 aa8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 ZNF468Q5VIY5 522 aaPredicted RBP8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
RNU6-1028P-201ENST00000517164 WFS1O76024 890 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 P4HBP07237 508 aaKnown RBP8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 PCBP4P57723 403 aaKnown RBP8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 PLCB3Q01970 1234 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 NEUROD1Q13562 356 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 SNX29Q8TEQ0 813 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 CNTNAP3BQ96NU0 1288 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 CNTNAP3Q9BZ76 1288 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 EFCC1Q9HA90 598 aa8.15□□□□□ -1.1
RNU6-1028P-201ENST00000517164 MAPK8P45983 427 aa8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 MAP2K3P46734 347 aa8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TTC39BQ5VTQ0 682 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 C1orf127Q8N9H9 656 aa8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 CHRDQ9H2X0 955 aa8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 KLF15Q9UIH9 416 aa8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 NSFL1CQ9UNZ2 370 aaKnown RBP8.14□□□□□ -1.11
RNU6-1028P-201ENST00000517164 PHACTR2O75167 634 aa8.13□□□□□ -1.11
RNU6-1028P-201ENST00000517164 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
RNU6-1028P-201ENST00000517164 CYP2E1P05181 493 aaPredicted RBP8.13□□□□□ -1.11
RNU6-1028P-201ENST00000517164 GMPRP36959 345 aa8.13□□□□□ -1.11
RNU6-1028P-201ENST00000517164 DHX32Q7L7V1 743 aaKnown RBP8.13□□□□□ -1.11
RNU6-1028P-201ENST00000517164 OR13H1Q8NG92 308 aa8.13□□□□□ -1.11
RNU6-1028P-201ENST00000517164 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ARAFP10398 606 aa8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 CSRNP1Q96S65 589 aa8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1028P-201ENST00000517164 PNMA6FA0A0J9YX94 578 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 NEURL1BA8MQ27 555 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 EREGO14944 169 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 SIN3BO75182 1162 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 NEFLP07196 543 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 PSAPP07602 524 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TAGLNQ01995 201 aaKnown RBP8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TREML4Q6UXN2 200 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 FBXO33Q7Z6M2 555 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
RNU6-1028P-201ENST00000517164 CPNE3O75131 537 aaKnown RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ADAMTS2O95450 1211 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 CES1P23141 567 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ADH6P28332 368 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 COL19A1Q14993 1142 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ENOX2Q16206 610 aaKnown RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 EAPPQ56P03 285 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 FCHSD1Q86WN1 690 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 TNFRSF25Q93038 417 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 NSUN5Q96P11 429 aaKnown RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 BCL2L13Q9BXK5 485 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 OXCT2Q9BYC2 517 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 DNAJC25Q9H1X3 360 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 WWC3Q9ULE0 1092 aa8.1□□□□□ -1.11
RNU6-1028P-201ENST00000517164 PHF20L1A8MW92 1017 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ZBTB42B2RXF5 422 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 SOX18P35713 384 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 PLAURQ03405 335 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 GIPC2Q8TF65 315 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 ACDQ96AP0 544 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 AMOTL2Q9Y2J4 779 aa8.09□□□□□ -1.11
RNU6-1028P-201ENST00000517164 LDHBP07195 334 aaKnown RBP8.08□□□□□ -1.12
RNU6-1028P-201ENST00000517164 HOXD8P13378 290 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1028P-201ENST00000517164 NRLP54845 237 aa8.08□□□□□ -1.12
RNU6-1028P-201ENST00000517164 GPLD1P80108 840 aa8.08□□□□□ -1.12
RNU6-1028P-201ENST00000517164 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
RNU6-1028P-201ENST00000517164 MDFIQ99750 246 aa8.08□□□□□ -1.12
RNU6-1028P-201ENST00000517164 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
RNU6-1028P-201ENST00000517164 ADH7P40394 386 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms