RNA–Protein interactions for RNA: ENST00000516296.1

RNU1-143P-201, Transcript of RNA, U1 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU1-143P, Length 146 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-143P-201ENST00000516296 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
RNU1-143P-201ENST00000516296 LIMCH1Q9UPQ0 1083 aa3.89□□□□□ -1.79
RNU1-143P-201ENST00000516296 ZKSCAN5Q9Y2L8 839 aa3.89□□□□□ -1.79
RNU1-143P-201ENST00000516296 CACNA1SQ13698 1873 aa3.89□□□□□ -1.79
RNU1-143P-201ENST00000516296 FOCADQ5VW36 1801 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 DISP2A7MBM2 1401 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 ZBTB7CA1YPR0 619 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 NBPF26B4DH59 902 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 HIP1O00291 1037 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 DTNBO60941 627 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 TAF5LO75529 589 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 ATP5JP18859 108 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 NCLP19338 710 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 RPS6KB1P23443 525 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 GJB2P29033 226 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 TERF1P54274 439 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 UBE2HP62256 183 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 UVSSAQ2YD98 709 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 TNNI3KQ59H18 835 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 NBPF14Q5TI25 921 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 NBPF10Q6P3W6 841 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 LARP1Q6PKG0 1096 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 RBM43Q6ZSC3 357 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 STOX1Q6ZVD7 989 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 CDC37L1Q7L3B6 337 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 ATG9AQ7Z3C6 839 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 TTC6Q86TZ1 520 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 CLASRPQ8N2M8 674 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 NBPF15Q8N660 670 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 RUFY2Q8WXA3 655 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 DDX17Q92841 729 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 EDC3Q96F86 508 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 ZSCAN31Q96LW9 406 aaPredicted RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 MYD88Q99836 296 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 LARP6Q9BRS8 491 aaKnown RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 CCDC8Q9H0W5 538 aaPredicted RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 PDRG1Q9NUG6 133 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 C9orf78Q9NZ63 289 aaPredicted RBP3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 TPCN1Q9ULQ1 816 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 FPGT-TNNI3KV9GXZ4 949 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 ELP1O95163 1332 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 SPATA31A3Q5VYP0 1347 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 SH3TC1Q8TE82 1336 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 SALL1Q9NSC2 1324 aa3.88□□□□□ -1.79
RNU1-143P-201ENST00000516296 ATRNO75882 1429 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 FOXP2O15409 715 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 DDX58O95786 925 aaKnown RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 CHGBP05060 677 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 TPM2P07951 284 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 IFIT2P09913 472 aaKnown RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 PRKCSHP14314 528 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 TATP17735 454 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 MCM5P33992 734 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 PIP4K2AP48426 406 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 ZC3H6P61129 1189 aaKnown RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 FOXO4P98177 505 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 DNM1Q05193 864 aaKnown RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 TFCP2Q12800 502 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 RESTQ13127 1097 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 G3BP1Q13283 466 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 OS9Q13438 667 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 KIAA1211Q6ZU35 1233 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 COPS6Q7L5N1 327 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 PROSER2Q86WR7 435 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 IFNL2Q8IZJ0 200 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 NECAB1Q8N987 351 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 FAM184AQ8NB25 1140 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 RNF214Q8ND24 703 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 DDX54Q8TDD1 881 aaKnown RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 GTF3C6Q969F1 213 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 SYAP1Q96A49 352 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 TRIM44Q96DX7 344 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 GPATCH3Q96I76 525 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 NAP1L5Q96NT1 182 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 DBNDD2Q9BQY9 259 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 AGXT2Q9BYV1 514 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 SIL1Q9H173 461 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 C19orf44Q9H6X5 657 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 HMG20BQ9P0W2 317 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 CCDC39Q9UFE4 941 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 SMC3Q9UQE7 1217 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 USP16Q9Y5T5 823 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 CYP46A1Q9Y6A2 500 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 NAV1Q8NEY1 1877 aa3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 AHDC1Q5TGY3 1603 aaPredicted RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 DDX60LQ5H9U9 1706 aaKnown RBP3.87□□□□□ -1.79
RNU1-143P-201ENST00000516296 MYH10P35580 1976 aa3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 H7C1W4 665 aa3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 FIBPO43427 364 aa3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 JAK2O60674 1132 aa3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 SNRPA1P09661 255 aaKnown RBP3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 HCLS1P14317 486 aaPredicted RBP3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 MYL6BP14649 208 aa3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 LIG1P18858 919 aa3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 AIMP1Q12904 312 aaKnown RBP3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 NKX1-1Q15270 411 aaPredicted RBP3.86□□□□□ -1.79
RNU1-143P-201ENST00000516296 FOXD4L6Q3SYB3 417 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms