RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
TRIM41-209ENST00000515834 NAPAP54920 295 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 AFMP43652 599 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 PRKG1Q13976 671 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
TRIM41-209ENST00000515834 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
TRIM41-209ENST00000515834 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
TRIM41-209ENST00000515834 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
TRIM41-209ENST00000515834 RAB3IL1Q8TBN0 382 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 MAP9Q49MG5 647 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 IMPG2Q9BZV3 1241 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 CLIP2Q9UDT6 1046 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
TRIM41-209ENST00000515834 NDC80O14777 642 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 GJB2P29033 226 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
TRIM41-209ENST00000515834 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 STAT6P42226 847 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
TRIM41-209ENST00000515834 SPDYE3A6NKU9 549 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 ACEP12821 1306 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 BACH1O14867 736 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 SH3BP5O60239 455 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
TRIM41-209ENST00000515834 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 C6orf50Q9HD87 102 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 ECHDC1Q9NTX5 307 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 BRPF3Q9ULD4 1205 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 RNF187Q5TA31 235 aaPredicted RBP12.6□□□□□ -0.39
TRIM41-209ENST00000515834 TMC6Q7Z403 805 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 APBB1IPQ7Z5R6 666 aaPredicted RBP12.6□□□□□ -0.39
TRIM41-209ENST00000515834 NEK1Q96PY6 1258 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
TRIM41-209ENST00000515834 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 USP37Q86T82 979 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 MAGEB6P1A0A0J9YX57 407 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
TRIM41-209ENST00000515834 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 MAATS1Q7Z4T9 603 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 PAIP2Q9BPZ3 127 aaKnown RBP12.59□□□□□ -0.39
TRIM41-209ENST00000515834 STK32BQ9NY57 414 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 ADGRL1O94910 1474 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
TRIM41-209ENST00000515834 FBLN1P23142 703 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 TNNI2P48788 182 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 RAB3GAP1Q15042 981 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 KRT23Q9C075 422 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 RRAGBQ5VZM2 374 aa12.59□□□□□ -0.39
TRIM41-209ENST00000515834 IDI1Q13907 227 aa12.58□□□□□ -0.39
TRIM41-209ENST00000515834 HELBQ8NG08 1087 aaPredicted RBP12.58□□□□□ -0.39
TRIM41-209ENST00000515834 NAA15Q9BXJ9 866 aaKnown RBP12.58□□□□□ -0.39
TRIM41-209ENST00000515834 PICK1Q9NRD5 415 aa12.58□□□□□ -0.39
TRIM41-209ENST00000515834 FAM13AO94988 1023 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 TRAF1Q13077 416 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 ALDH1L2Q3SY69 923 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 EAPPQ56P03 285 aaPredicted RBP12.58□□□□□ -0.4
TRIM41-209ENST00000515834 ESR2Q92731 530 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 DAPK1P53355 1430 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 GNPATO15228 680 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 HARSP12081 509 aaKnown RBP12.58□□□□□ -0.4
TRIM41-209ENST00000515834 MCM5P33992 734 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 HSPA2P54652 639 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 HSP90AA4PQ58FG1 418 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
TRIM41-209ENST00000515834 CCDC172P0C7W6 258 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 ARID5AQ03989 594 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 RTN1Q16799 776 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 GSTA5Q7RTV2 222 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
TRIM41-209ENST00000515834 SAP30BPQ9UHR5 308 aaKnown RBP12.58□□□□□ -0.4
TRIM41-209ENST00000515834 BIRC2Q13490 618 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 SPOUT1Q5T280 376 aaKnown RBP12.57□□□□□ -0.4
TRIM41-209ENST00000515834 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 FAM135AQ9P2D6 1515 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 ZBTB43O43298 467 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 CBX1P83916 185 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 CCDC63Q8NA47 563 aa12.57□□□□□ -0.4
TRIM41-209ENST00000515834 SREK1Q8WXA9 508 aaKnown RBP12.57□□□□□ -0.4
TRIM41-209ENST00000515834 PTPRCP08575 1304 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms