RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 DDX46Q7L014 1031 aaKnown RBP15□□□□□ -0.01
SNF8-215ENST00000515572 DZIP1LQ8IYY4 767 aaKnown RBP15□□□□□ -0.01
SNF8-215ENST00000515572 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
SNF8-215ENST00000515572 CLUAP1Q96AJ1 413 aa15□□□□□ -0.01
SNF8-215ENST00000515572 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
SNF8-215ENST00000515572 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
SNF8-215ENST00000515572 WWC3Q9ULE0 1092 aa14.99□□□□□ -0.01
SNF8-215ENST00000515572 TAF1P21675 1872 aa14.99□□□□□ -0.01
SNF8-215ENST00000515572 NBPF7P0C2Y1 421 aaPredicted RBP14.98□□□□□ -0.01
SNF8-215ENST00000515572 YBX3P16989 372 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■□□□ 14.4
SNF8-215ENST00000515572 SOGA3Q5TF21 947 aa14.98□□□□□ -0.01
SNF8-215ENST00000515572 TTLL11Q8NHH1 800 aa14.98□□□□□ -0.01
SNF8-215ENST00000515572 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
SNF8-215ENST00000515572 BBOX1O75936 387 aa14.97□□□□□ -0.01
SNF8-215ENST00000515572 CSF1RP07333 972 aa14.97□□□□□ -0.01
SNF8-215ENST00000515572 GNAI3P08754 354 aa14.97□□□□□ -0.01
SNF8-215ENST00000515572 UBTFL1P0CB47 393 aaPredicted RBP14.97□□□□□ -0.01
SNF8-215ENST00000515572 GRAPQ13588 217 aa14.97□□□□□ -0.01
SNF8-215ENST00000515572 TMEM57Q8N5G2 664 aa14.97□□□□□ -0.01
SNF8-215ENST00000515572 GRAPLQ8TC17 118 aaPredicted RBP14.97□□□□□ -0.01
SNF8-215ENST00000515572 FOXO4P98177 505 aa14.96□□□□□ -0.01
SNF8-215ENST00000515572 PDE3AQ14432 1141 aa14.96□□□□□ -0.01
SNF8-215ENST00000515572 FER1L6Q2WGJ9 1857 aa14.96□□□□□ -0.01
SNF8-215ENST00000515572 CC2D2BQ6DHV5 1058 aa14.96□□□□□ -0.01
SNF8-215ENST00000515572 TMC4Q7Z404 712 aa14.96□□□□□ -0.01
SNF8-215ENST00000515572 LRRC37AA6NMS7 1700 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 SPEF2Q9C093 1822 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
SNF8-215ENST00000515572 RLBP1P12271 317 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 GRIPAP1Q4V328 841 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 C7orf43Q8WVR3 580 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
SNF8-215ENST00000515572 TMX4Q9H1E5 349 aaPredicted RBP14.95□□□□□ -0.02
SNF8-215ENST00000515572 CHD4Q14839 1912 aa14.95□□□□□ -0.02
SNF8-215ENST00000515572 C21orf2O43822 256 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 PLIN1O60240 522 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 RPS8P62241 208 aaKnown RBP14.94□□□□□ -0.02
SNF8-215ENST00000515572 RABL6Q3YEC7 729 aaPredicted RBP14.94□□□□□ -0.02
SNF8-215ENST00000515572 CCDC93Q567U6 631 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 ITPRIPQ8IWB1 547 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 KAZALD1Q96I82 304 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 CCDC85AQ96PX6 553 aaPredicted RBP14.94□□□□□ -0.02
SNF8-215ENST00000515572 MEIS3Q99687 375 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 GREM2Q9H772 168 aa14.94□□□□□ -0.02
SNF8-215ENST00000515572 IFIT5Q13325 482 aaKnown RBP14.93□□□□□ -0.02
SNF8-215ENST00000515572 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
SNF8-215ENST00000515572 EPHA10Q5JZY3 1008 aa14.93□□□□□ -0.02
SNF8-215ENST00000515572 ANKRD18AQ8IVF6 992 aa14.93□□□□□ -0.02
SNF8-215ENST00000515572 PANK1Q8TE04 598 aa14.93□□□□□ -0.02
SNF8-215ENST00000515572 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
SNF8-215ENST00000515572 BICC1Q9H694 974 aaKnown RBP14.93□□□□□ -0.02
SNF8-215ENST00000515572 ATP6V0A2Q9Y487 856 aa14.93□□□□□ -0.02
SNF8-215ENST00000515572 ANKRD18BA2A2Z9 1011 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 ITGA6P23229 1130 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 RRP1P56182 461 aaKnown RBP14.92□□□□□ -0.02
SNF8-215ENST00000515572 MVPQ14764 893 aaKnown RBP14.92□□□□□ -0.02
SNF8-215ENST00000515572 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 ARHGAP27Q6ZUM4 889 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 SP8Q8IXZ3 490 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 RTKN2Q8IZC4 609 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
SNF8-215ENST00000515572 SEC31BQ9NQW1 1179 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 SBF1O95248 1867 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 LTBP3Q9NS15 1303 aa14.92□□□□□ -0.02
SNF8-215ENST00000515572 COL4A1P02462 1669 aa14.91□□□□□ -0.02
SNF8-215ENST00000515572 ZBTB7BO15156 539 aaPredicted RBP14.91□□□□□ -0.02
SNF8-215ENST00000515572 GNAI2P04899 355 aa14.91□□□□□ -0.02
SNF8-215ENST00000515572 IGHMBP2P38935 993 aaKnown RBP14.91□□□□□ -0.02
SNF8-215ENST00000515572 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
SNF8-215ENST00000515572 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
SNF8-215ENST00000515572 DDX19BQ9UMR2 479 aa14.91□□□□□ -0.02
SNF8-215ENST00000515572 CCDC88AQ3V6T2 1871 aa14.91□□□□□ -0.02
SNF8-215ENST00000515572 LRRFIP2Q9Y608 721 aaKnown RBP14.9□□□□□ -0.02
SNF8-215ENST00000515572 SNED1Q8TER0 1413 aa14.9□□□□□ -0.02
SNF8-215ENST00000515572 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
SNF8-215ENST00000515572 MPHOSPH8Q99549 860 aa14.89□□□□□ -0.03
SNF8-215ENST00000515572 TAOK3Q9H2K8 898 aa14.89□□□□□ -0.03
SNF8-215ENST00000515572 BSDC1Q9NW68 430 aaPredicted RBP14.89□□□□□ -0.03
SNF8-215ENST00000515572 COG6Q9Y2V7 657 aa14.89□□□□□ -0.03
SNF8-215ENST00000515572 DICER1Q9UPY3 1922 aaKnown RBP14.89□□□□□ -0.03
SNF8-215ENST00000515572 LTBP1Q14766 1721 aa14.89□□□□□ -0.03
SNF8-215ENST00000515572 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
SNF8-215ENST00000515572 C20orf194Q5TEA3 1177 aa14.88□□□□□ -0.03
SNF8-215ENST00000515572 PSMD1Q99460 953 aa14.88□□□□□ -0.03
SNF8-215ENST00000515572 A0A1B0GUL6 1792 aa14.88□□□□□ -0.03
SNF8-215ENST00000515572 NFKBIEO00221 500 aa14.87□□□□□ -0.03
SNF8-215ENST00000515572 MTX1Q13505 466 aa14.87□□□□□ -0.03
SNF8-215ENST00000515572 OLFM4Q6UX06 510 aa14.87□□□□□ -0.03
SNF8-215ENST00000515572 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
SNF8-215ENST00000515572 MPNDQ8N594 471 aa14.87□□□□□ -0.03
SNF8-215ENST00000515572 SUPT20HQ8NEM7 779 aa14.87□□□□□ -0.03
SNF8-215ENST00000515572 LMNB1P20700 586 aa14.86□□□□□ -0.03
SNF8-215ENST00000515572 LDHAL6AQ6ZMR3 332 aa14.86□□□□□ -0.03
SNF8-215ENST00000515572 RTFDC1Q9BY42 306 aaPredicted RBP14.86□□□□□ -0.03
SNF8-215ENST00000515572 PODXL2Q9NZ53 605 aa14.86□□□□□ -0.03
SNF8-215ENST00000515572 RASSF7Q02833 373 aa14.85□□□□□ -0.03
SNF8-215ENST00000515572 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms