RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 LAMB2P55268 1798 aa31.86■■■□□ 2.69
SPOCK3-224ENST00000515316 ARFGEF1Q9Y6D6 1849 aa31.85■■■□□ 2.69
SPOCK3-224ENST00000515316 GRAPQ13588 217 aa31.85■■■□□ 2.69
SPOCK3-224ENST00000515316 TTLL11Q8NHH1 800 aa31.85■■■□□ 2.69
SPOCK3-224ENST00000515316 GRAPLQ8TC17 118 aaPredicted RBP31.85■■■□□ 2.69
SPOCK3-224ENST00000515316 TMX4Q9H1E5 349 aaPredicted RBP31.85■■■□□ 2.69
SPOCK3-224ENST00000515316 C7orf43Q8WVR3 580 aa31.84■■■□□ 2.69
SPOCK3-224ENST00000515316 USP44Q9H0E7 712 aa31.84■■■□□ 2.69
SPOCK3-224ENST00000515316 NBPF7P0C2Y1 421 aaPredicted RBP31.83■■■□□ 2.69
SPOCK3-224ENST00000515316 CC2D2BQ6DHV5 1058 aa31.83■■■□□ 2.69
SPOCK3-224ENST00000515316 CLUAP1Q96AJ1 413 aa31.83■■■□□ 2.69
SPOCK3-224ENST00000515316 SLX4Q8IY92 1834 aa31.82■■■□□ 2.68
SPOCK3-224ENST00000515316 PPEF1O14829 653 aaPredicted RBP31.82■■■□□ 2.68
SPOCK3-224ENST00000515316 MS4A1P11836 297 aa31.82■■■□□ 2.68
SPOCK3-224ENST00000515316 TMC4Q7Z404 712 aa31.82■■■□□ 2.68
SPOCK3-224ENST00000515316 FTSJ3Q8IY81 847 aaKnown RBP31.82■■■□□ 2.68
SPOCK3-224ENST00000515316 HDAC5Q9UQL6 1122 aa31.82■■■□□ 2.68
SPOCK3-224ENST00000515316 CSF1RP07333 972 aa31.81■■■□□ 2.68
SPOCK3-224ENST00000515316 DZIP1LQ8IYY4 767 aaKnown RBP31.81■■■□□ 2.68
SPOCK3-224ENST00000515316 CCDC85AQ96PX6 553 aaPredicted RBP31.81■■■□□ 2.68
SPOCK3-224ENST00000515316 GRIPAP1Q4V328 841 aa31.8■■■□□ 2.68
SPOCK3-224ENST00000515316 CCDC93Q567U6 631 aa31.8■■■□□ 2.68
SPOCK3-224ENST00000515316 RPS8P62241 208 aaKnown RBP31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 FOXO4P98177 505 aa31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 RTKN2Q8IZC4 609 aa31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 TNNQ9UQP3 1299 aa31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 ATP6V0A2Q9Y487 856 aa31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 RTL9Q8NET4 1388 aa31.79■■■□□ 2.68
SPOCK3-224ENST00000515316 SP8Q8IXZ3 490 aa31.78■■■□□ 2.68
SPOCK3-224ENST00000515316 CDC5LQ99459 802 aaKnown RBP31.78■■■□□ 2.68
SPOCK3-224ENST00000515316 SEC31BQ9NQW1 1179 aa31.78■■■□□ 2.68
SPOCK3-224ENST00000515316 CELF1Q92879 486 aaKnown RBP31.77■■■□□ 2.68
SPOCK3-224ENST00000515316 SUCLG2Q96I99 432 aa31.77■■■□□ 2.68
SPOCK3-224ENST00000515316 GREM2Q9H772 168 aa31.77■■■□□ 2.68
SPOCK3-224ENST00000515316 CACNA1SQ13698 1873 aa31.77■■■□□ 2.68
SPOCK3-224ENST00000515316 UBTFL1P0CB47 393 aaPredicted RBP31.76■■■□□ 2.67
SPOCK3-224ENST00000515316 ANKRD18AQ8IVF6 992 aa31.76■■■□□ 2.67
SPOCK3-224ENST00000515316 TMEM57Q8N5G2 664 aa31.76■■■□□ 2.67
SPOCK3-224ENST00000515316 GNAI3P08754 354 aa31.75■■■□□ 2.67
SPOCK3-224ENST00000515316 EPHA10Q5JZY3 1008 aa31.75■■■□□ 2.67
SPOCK3-224ENST00000515316 LMBR1LQ6UX01 489 aa31.75■■■□□ 2.67
SPOCK3-224ENST00000515316 GOLGB1Q14789 3259 aaKnown RBP31.74■■■□□ 2.67
SPOCK3-224ENST00000515316 CHMP3Q9Y3E7 222 aa31.74■■■□□ 2.67
SPOCK3-224ENST00000515316 MYH3P11055 1940 aa31.74■■■□□ 2.67
SPOCK3-224ENST00000515316 ANKRD18BA2A2Z9 1011 aa31.73■■■□□ 2.67
SPOCK3-224ENST00000515316 ITGA6P23229 1130 aa31.73■■■□□ 2.67
SPOCK3-224ENST00000515316 KAZALD1Q96I82 304 aa31.73■■■□□ 2.67
SPOCK3-224ENST00000515316 IFIT5Q13325 482 aaKnown RBP31.72■■■□□ 2.67
SPOCK3-224ENST00000515316 FAM161AQ3B820 660 aa31.72■■■□□ 2.67
SPOCK3-224ENST00000515316 TAOK3Q9H2K8 898 aa31.72■■■□□ 2.67
SPOCK3-224ENST00000515316 NFKBIEO00221 500 aa31.71■■■□□ 2.67
SPOCK3-224ENST00000515316 CCDC57Q2TAC2 916 aa31.71■■■□□ 2.67
SPOCK3-224ENST00000515316 OLFM4Q6UX06 510 aa31.71■■■□□ 2.67
SPOCK3-224ENST00000515316 BICC1Q9H694 974 aaKnown RBP31.71■■■□□ 2.67
SPOCK3-224ENST00000515316 LTBP3Q9NS15 1303 aa31.71■■■□□ 2.67
SPOCK3-224ENST00000515316 IGHMBP2P38935 993 aaKnown RBP31.7■■■□□ 2.67
SPOCK3-224ENST00000515316 FKBP4Q02790 459 aaKnown RBP eCLIP31.7■■■□□ 2.67
SPOCK3-224ENST00000515316 MEIS3Q99687 375 aa31.7■■■□□ 2.67
SPOCK3-224ENST00000515316 PLIN1O60240 522 aa31.69■■■□□ 2.66
SPOCK3-224ENST00000515316 RLBP1P12271 317 aa31.69■■■□□ 2.66
SPOCK3-224ENST00000515316 RABL6Q3YEC7 729 aaPredicted RBP31.69■■■□□ 2.66
SPOCK3-224ENST00000515316 ITPRIPQ8IWB1 547 aa31.69■■■□□ 2.66
SPOCK3-224ENST00000515316 LMNB1P20700 586 aa31.68■■■□□ 2.66
SPOCK3-224ENST00000515316 RASSF7Q02833 373 aa31.68■■■□□ 2.66
SPOCK3-224ENST00000515316 MPNDQ8N594 471 aa31.68■■■□□ 2.66
SPOCK3-224ENST00000515316 PANK1Q8TE04 598 aa31.68■■■□□ 2.66
SPOCK3-224ENST00000515316 PSMD1Q99460 953 aa31.68■■■□□ 2.66
SPOCK3-224ENST00000515316 BSDC1Q9NW68 430 aaPredicted RBP31.68■■■□□ 2.66
SPOCK3-224ENST00000515316 TAF1P21675 1872 aa31.67■■■□□ 2.66
SPOCK3-224ENST00000515316 MPHOSPH8Q99549 860 aa31.67■■■□□ 2.66
SPOCK3-224ENST00000515316 PDE3AQ14432 1141 aa31.66■■■□□ 2.66
SPOCK3-224ENST00000515316 DPP8Q6V1X1 898 aaPredicted RBP31.66■■■□□ 2.66
SPOCK3-224ENST00000515316 ANKRD44Q8N8A2 993 aa31.66■■■□□ 2.66
SPOCK3-224ENST00000515316 TAF7LQ5H9L4 462 aa31.65■■■□□ 2.66
SPOCK3-224ENST00000515316 SUPT20HQ8NEM7 779 aa31.65■■■□□ 2.66
SPOCK3-224ENST00000515316 LRRFIP2Q9Y608 721 aaKnown RBP31.65■■■□□ 2.66
SPOCK3-224ENST00000515316 FER1L6Q2WGJ9 1857 aa31.65■■■□□ 2.66
SPOCK3-224ENST00000515316 CHD4Q14839 1912 aa31.65■■■□□ 2.66
SPOCK3-224ENST00000515316 GNAI2P04899 355 aa31.64■■■□□ 2.66
SPOCK3-224ENST00000515316 C9orf131Q5VYM1 1079 aa31.64■■■□□ 2.66
SPOCK3-224ENST00000515316 RNF181Q9P0P0 153 aa31.64■■■□□ 2.66
SPOCK3-224ENST00000515316 NSFL1CQ9UNZ2 370 aaKnown RBP31.63■■■□□ 2.65
SPOCK3-224ENST00000515316 SNED1Q8TER0 1413 aa31.62■■■□□ 2.65
SPOCK3-224ENST00000515316 UTRNP46939 3433 aa31.62■■■□□ 2.65
SPOCK3-224ENST00000515316 ZBTB7BO15156 539 aaPredicted RBP31.61■■■□□ 2.65
SPOCK3-224ENST00000515316 RTFDC1Q9BY42 306 aaPredicted RBP31.61■■■□□ 2.65
SPOCK3-224ENST00000515316 VPS33BQ9H267 617 aa31.61■■■□□ 2.65
SPOCK3-224ENST00000515316 CHMP4BQ9H444 224 aaKnown RBP31.61■■■□□ 2.65
SPOCK3-224ENST00000515316 YY1P25490 414 aa31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 GPSM2P81274 684 aa31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 MVPQ14764 893 aaKnown RBP31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 SLC51AQ86UW1 340 aa31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 ZNF277Q9NRM2 450 aaPredicted RBP31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 ANKIB1Q9P2G1 1089 aa31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 MINPP1Q9UNW1 487 aa31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 COL4A1P02462 1669 aa31.6■■■□□ 2.65
SPOCK3-224ENST00000515316 LDHAL6AQ6ZMR3 332 aa31.59■■■□□ 2.65
SPOCK3-224ENST00000515316 PODXL2Q9NZ53 605 aa31.59■■■□□ 2.65
SPOCK3-224ENST00000515316 DDX19BQ9UMR2 479 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms