RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 NEXNQ0ZGT2 675 aa31.4■■■□□ 2.62
SNF8-213ENST00000514929 LARGE2Q8N3Y3 721 aa31.4■■■□□ 2.62
SNF8-213ENST00000514929 FZD9O00144 591 aa31.39■■■□□ 2.62
SNF8-213ENST00000514929 VAMP4O75379 141 aa31.39■■■□□ 2.62
SNF8-213ENST00000514929 PCCAP05165 728 aaPredicted RBP31.39■■■□□ 2.62
SNF8-213ENST00000514929 TMC4Q7Z404 712 aa31.39■■■□□ 2.62
SNF8-213ENST00000514929 DPP8Q6V1X1 898 aaPredicted RBP31.38■■■□□ 2.61
SNF8-213ENST00000514929 SUPT20HQ8NEM7 779 aa31.38■■■□□ 2.61
SNF8-213ENST00000514929 TAF1P21675 1872 aa31.38■■■□□ 2.61
SNF8-213ENST00000514929 APLP1P51693 650 aa31.37■■■□□ 2.61
SNF8-213ENST00000514929 MPNDQ8N594 471 aa31.37■■■□□ 2.61
SNF8-213ENST00000514929 IQCA1LA6NCM1 817 aa31.36■■■□□ 2.61
SNF8-213ENST00000514929 PPIP5K2O43314 1243 aa31.36■■■□□ 2.61
SNF8-213ENST00000514929 EIF6P56537 245 aaKnown RBP31.36■■■□□ 2.61
SNF8-213ENST00000514929 FLIIQ13045 1269 aa31.36■■■□□ 2.61
SNF8-213ENST00000514929 JARID2Q92833 1246 aaPredicted RBP31.36■■■□□ 2.61
SNF8-213ENST00000514929 L3MBTL3Q96JM7 780 aaPredicted RBP31.36■■■□□ 2.61
SNF8-213ENST00000514929 CEP350Q5VT06 3117 aa31.35■■■□□ 2.61
SNF8-213ENST00000514929 CELF1Q92879 486 aaKnown RBP31.35■■■□□ 2.61
SNF8-213ENST00000514929 COL4A5P29400 1685 aa31.35■■■□□ 2.61
SNF8-213ENST00000514929 IGKV5-2P06315 115 aa31.34■■■□□ 2.61
SNF8-213ENST00000514929 FKBP5Q13451 457 aaPredicted RBP31.34■■■□□ 2.61
SNF8-213ENST00000514929 NIM1KQ8IY84 436 aa31.34■■■□□ 2.61
SNF8-213ENST00000514929 RTFDC1Q9BY42 306 aaPredicted RBP31.34■■■□□ 2.61
SNF8-213ENST00000514929 VPS33BQ9H267 617 aa31.34■■■□□ 2.61
SNF8-213ENST00000514929 PDE8AO60658 829 aa31.33■■■□□ 2.61
SNF8-213ENST00000514929 AOC3Q16853 763 aa31.33■■■□□ 2.61
SNF8-213ENST00000514929 CWF19L2Q2TBE0 894 aaKnown RBP31.32■■■□□ 2.6
SNF8-213ENST00000514929 GPC2Q8N158 579 aa31.32■■■□□ 2.6
SNF8-213ENST00000514929 ZNF521Q96K83 1311 aa31.31■■■□□ 2.6
SNF8-213ENST00000514929 CACNA1FO60840 1977 aa31.31■■■□□ 2.6
SNF8-213ENST00000514929 CCDC152Q4G0S7 254 aa31.31■■■□□ 2.6
SNF8-213ENST00000514929 GJA3Q9Y6H8 435 aa31.31■■■□□ 2.6
SNF8-213ENST00000514929 SCN4AP35499 1836 aa31.31■■■□□ 2.6
SNF8-213ENST00000514929 CDHR2Q9BYE9 1310 aa31.3■■■□□ 2.6
SNF8-213ENST00000514929 NEURL1BA8MQ27 555 aa31.3■■■□□ 2.6
SNF8-213ENST00000514929 LRRC37AA6NMS7 1700 aa31.29■■■□□ 2.6
SNF8-213ENST00000514929 RPS8P62241 208 aaKnown RBP31.29■■■□□ 2.6
SNF8-213ENST00000514929 TAF1DQ9H5J8 278 aaPredicted RBP31.29■■■□□ 2.6
SNF8-213ENST00000514929 HACL1Q9UJ83 578 aa31.29■■■□□ 2.6
SNF8-213ENST00000514929 DNAAF4Q8WXU2 420 aa31.28■■■□□ 2.6
SNF8-213ENST00000514929 CCDC85AQ96PX6 553 aaPredicted RBP31.28■■■□□ 2.6
SNF8-213ENST00000514929 SEC31BQ9NQW1 1179 aa31.28■■■□□ 2.6
SNF8-213ENST00000514929 NSFL1CQ9UNZ2 370 aaKnown RBP31.28■■■□□ 2.6
SNF8-213ENST00000514929 COL4A1P02462 1669 aa31.27■■■□□ 2.6
SNF8-213ENST00000514929 CCER2I3L3R5 266 aa31.26■■■□□ 2.59
SNF8-213ENST00000514929 KIAA2012Q0VF49 1180 aa31.26■■■□□ 2.59
SNF8-213ENST00000514929 POTEIP0CG38 1075 aa31.25■■■□□ 2.59
SNF8-213ENST00000514929 POTEJP0CG39 1038 aa31.25■■■□□ 2.59
SNF8-213ENST00000514929 CHADLQ6NUI6 762 aa31.25■■■□□ 2.59
SNF8-213ENST00000514929 ZNRF3Q9ULT6 936 aa31.25■■■□□ 2.59
SNF8-213ENST00000514929 EPHX2P34913 555 aa31.24■■■□□ 2.59
SNF8-213ENST00000514929 CTSWP56202 376 aa31.24■■■□□ 2.59
SNF8-213ENST00000514929 EAPPQ56P03 285 aaPredicted RBP31.24■■■□□ 2.59
SNF8-213ENST00000514929 UBE3BQ7Z3V4 1068 aa31.24■■■□□ 2.59
SNF8-213ENST00000514929 DUOX1Q9NRD9 1551 aa31.24■■■□□ 2.59
SNF8-213ENST00000514929 GPSM2P81274 684 aa31.23■■■□□ 2.59
SNF8-213ENST00000514929 GCKRQ14397 625 aa31.23■■■□□ 2.59
SNF8-213ENST00000514929 LDHDQ86WU2 507 aa31.23■■■□□ 2.59
SNF8-213ENST00000514929 LINS1Q8NG48 757 aa31.23■■■□□ 2.59
SNF8-213ENST00000514929 C6orf229H3BNL8 230 aa31.22■■■□□ 2.59
SNF8-213ENST00000514929 H7C1W4 665 aa31.22■■■□□ 2.59
SNF8-213ENST00000514929 LMOD1P29536 600 aaPredicted RBP31.22■■■□□ 2.59
SNF8-213ENST00000514929 E9PSI1 815 aa31.21■■■□□ 2.59
SNF8-213ENST00000514929 HTRA3P83110 453 aa31.21■■■□□ 2.59
SNF8-213ENST00000514929 WASHC4Q2M389 1173 aa31.2■■■□□ 2.59
SNF8-213ENST00000514929 PNMA8AQ86V59 439 aaPredicted RBP31.2■■■□□ 2.59
SNF8-213ENST00000514929 ANKRD18AQ8IVF6 992 aa31.2■■■□□ 2.59
SNF8-213ENST00000514929 CLEC11AQ9Y240 323 aa31.2■■■□□ 2.59
SNF8-213ENST00000514929 F6X3S4 739 aa31.19■■■□□ 2.58
SNF8-213ENST00000514929 CXCL9Q07325 125 aa31.19■■■□□ 2.58
SNF8-213ENST00000514929 TTLL11Q8NHH1 800 aa31.19■■■□□ 2.58
SNF8-213ENST00000514929 CDC5LQ99459 802 aaKnown RBP31.19■■■□□ 2.58
SNF8-213ENST00000514929 POLLQ9UGP5 575 aa31.19■■■□□ 2.58
SNF8-213ENST00000514929 EYA3Q99504 573 aa31.18■■■□□ 2.58
SNF8-213ENST00000514929 MYH3P11055 1940 aa31.18■■■□□ 2.58
SNF8-213ENST00000514929 RIMBP2O15034 1052 aa31.17■■■□□ 2.58
SNF8-213ENST00000514929 SCNN1DP51172 638 aa31.17■■■□□ 2.58
SNF8-213ENST00000514929 DNAJC5GQ8N7S2 189 aa31.17■■■□□ 2.58
SNF8-213ENST00000514929 ANKIB1Q9P2G1 1089 aa31.17■■■□□ 2.58
SNF8-213ENST00000514929 CIAPIN1Q6FI81 312 aa31.16■■■□□ 2.58
SNF8-213ENST00000514929 TBC1D16Q8TBP0 767 aa31.16■■■□□ 2.58
SNF8-213ENST00000514929 GREM2Q9H772 168 aa31.16■■■□□ 2.58
SNF8-213ENST00000514929 RAD17O75943 681 aa31.15■■■□□ 2.58
SNF8-213ENST00000514929 TNIP1Q15025 636 aa31.15■■■□□ 2.58
SNF8-213ENST00000514929 PODXL2Q9NZ53 605 aa31.15■■■□□ 2.58
SNF8-213ENST00000514929 LTBP1Q14766 1721 aa31.15■■■□□ 2.58
SNF8-213ENST00000514929 EPS15P42566 896 aa31.14■■■□□ 2.58
SNF8-213ENST00000514929 SLFN5Q08AF3 891 aa31.14■■■□□ 2.58
SNF8-213ENST00000514929 BEND3Q5T5X7 828 aa31.14■■■□□ 2.58
SNF8-213ENST00000514929 RTL9Q8NET4 1388 aa31.14■■■□□ 2.58
SNF8-213ENST00000514929 UFL1O94874 794 aa31.13■■■□□ 2.57
SNF8-213ENST00000514929 CASP7P55210 303 aa31.13■■■□□ 2.57
SNF8-213ENST00000514929 GPR101Q96P66 508 aaPredicted RBP31.13■■■□□ 2.57
SNF8-213ENST00000514929 PLA2G12BQ9BX93 195 aa31.13■■■□□ 2.57
SNF8-213ENST00000514929 DBNDD1Q9H9R9 158 aa31.13■■■□□ 2.57
SNF8-213ENST00000514929 GGA1Q9UJY5 639 aa31.13■■■□□ 2.57
SNF8-213ENST00000514929 YDJCA8MPS7 323 aa31.12■■■□□ 2.57
SNF8-213ENST00000514929 ZC3H12CQ9C0D7 883 aaKnown RBP31.12■■■□□ 2.57
SNF8-213ENST00000514929 ADAMTSL1Q8N6G6 1762 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms