RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 GMPSP49915 693 aaPredicted RBP29.96■■■□□ 2.39
SMAD1-214ENST00000514831 MPNDQ8N594 471 aa29.96■■■□□ 2.39
SMAD1-214ENST00000514831 XAGE3Q8WTP9 111 aa29.96■■■□□ 2.39
SMAD1-214ENST00000514831 GPR101Q96P66 508 aaPredicted RBP29.96■■■□□ 2.39
SMAD1-214ENST00000514831 SH3TC1Q8TE82 1336 aa29.96■■■□□ 2.39
SMAD1-214ENST00000514831 CIAPIN1Q6FI81 312 aa29.95■■■□□ 2.39
SMAD1-214ENST00000514831 DDX46Q7L014 1031 aaKnown RBP29.95■■■□□ 2.39
SMAD1-214ENST00000514831 ABHD8Q96I13 439 aa29.95■■■□□ 2.39
SMAD1-214ENST00000514831 BEGAINQ9BUH8 593 aa29.95■■■□□ 2.39
SMAD1-214ENST00000514831 AIMP1Q12904 312 aaKnown RBP29.94■■■□□ 2.38
SMAD1-214ENST00000514831 TCIRG1Q13488 830 aa29.94■■■□□ 2.38
SMAD1-214ENST00000514831 GRAPQ13588 217 aa29.94■■■□□ 2.38
SMAD1-214ENST00000514831 GRAPLQ8TC17 118 aaPredicted RBP29.94■■■□□ 2.38
SMAD1-214ENST00000514831 TRMT112Q9UI30 125 aaKnown RBP29.94■■■□□ 2.38
SMAD1-214ENST00000514831 GRM1Q13255 1194 aa29.93■■■□□ 2.38
SMAD1-214ENST00000514831 NECTIN2Q92692 538 aa29.93■■■□□ 2.38
SMAD1-214ENST00000514831 PGAP2Q9UHJ9 254 aa29.93■■■□□ 2.38
SMAD1-214ENST00000514831 TMC4Q7Z404 712 aa29.92■■■□□ 2.38
SMAD1-214ENST00000514831 SAPCD2Q86UD0 394 aa29.92■■■□□ 2.38
SMAD1-214ENST00000514831 CELF2O95319 508 aaKnown RBP29.91■■■□□ 2.38
SMAD1-214ENST00000514831 MAP2K2P36507 400 aa29.91■■■□□ 2.38
SMAD1-214ENST00000514831 TNIP1Q15025 636 aa29.91■■■□□ 2.38
SMAD1-214ENST00000514831 ZC3H15Q8WU90 426 aaKnown RBP29.91■■■□□ 2.38
SMAD1-214ENST00000514831 RALBP1Q15311 655 aa29.9■■■□□ 2.38
SMAD1-214ENST00000514831 HHIPL1Q96JK4 782 aa29.9■■■□□ 2.38
SMAD1-214ENST00000514831 BCL2L13Q9BXK5 485 aa29.9■■■□□ 2.38
SMAD1-214ENST00000514831 GLIS2Q9BZE0 524 aaPredicted RBP29.9■■■□□ 2.38
SMAD1-214ENST00000514831 RAD17O75943 681 aa29.89■■■□□ 2.38
SMAD1-214ENST00000514831 YDJCA8MPS7 323 aa29.88■■■□□ 2.37
SMAD1-214ENST00000514831 KRT24Q2M2I5 525 aa29.88■■■□□ 2.37
SMAD1-214ENST00000514831 CHL1O00533 1208 aa29.87■■■□□ 2.37
SMAD1-214ENST00000514831 AOC2O75106 756 aa29.87■■■□□ 2.37
SMAD1-214ENST00000514831 HIRAP54198 1017 aaPredicted RBP29.87■■■□□ 2.37
SMAD1-214ENST00000514831 TRPM4Q8TD43 1214 aa29.87■■■□□ 2.37
SMAD1-214ENST00000514831 CHPF2Q9P2E5 772 aa29.87■■■□□ 2.37
SMAD1-214ENST00000514831 PLBD2Q8NHP8 589 aa29.85■■■□□ 2.37
SMAD1-214ENST00000514831 CA12O43570 354 aa29.84■■■□□ 2.37
SMAD1-214ENST00000514831 CDC37L1Q7L3B6 337 aa29.84■■■□□ 2.37
SMAD1-214ENST00000514831 CNOT7Q9UIV1 285 aaKnown RBP29.84■■■□□ 2.37
SMAD1-214ENST00000514831 COL4A1P02462 1669 aa29.83■■■□□ 2.37
SMAD1-214ENST00000514831 HOXB7P09629 217 aa29.83■■■□□ 2.37
SMAD1-214ENST00000514831 SHTN1A0MZ66 631 aa29.82■■■□□ 2.36
SMAD1-214ENST00000514831 BRPF1P55201 1214 aaPredicted RBP29.82■■■□□ 2.36
SMAD1-214ENST00000514831 HDGFL1Q5TGJ6 251 aa29.82■■■□□ 2.36
SMAD1-214ENST00000514831 MICALL2Q8IY33 904 aa29.82■■■□□ 2.36
SMAD1-214ENST00000514831 ISCA1Q9BUE6 129 aa29.82■■■□□ 2.36
SMAD1-214ENST00000514831 ZNF408Q9H9D4 720 aa29.82■■■□□ 2.36
SMAD1-214ENST00000514831 H7C1D1 291 aa29.81■■■□□ 2.36
SMAD1-214ENST00000514831 SF3B3Q15393 1217 aaKnown RBP29.81■■■□□ 2.36
SMAD1-214ENST00000514831 NEUROD2Q15784 382 aa29.81■■■□□ 2.36
SMAD1-214ENST00000514831 CCDC146Q8IYE0 955 aa29.81■■■□□ 2.36
SMAD1-214ENST00000514831 TSKSQ9UJT2 592 aa29.81■■■□□ 2.36
SMAD1-214ENST00000514831 TRIM35Q9UPQ4 493 aa29.81■■■□□ 2.36
SMAD1-214ENST00000514831 WASHC4Q2M389 1173 aa29.8■■■□□ 2.36
SMAD1-214ENST00000514831 ANKRD13DQ6ZTN6 518 aa29.8■■■□□ 2.36
SMAD1-214ENST00000514831 DPF2Q92785 391 aa29.8■■■□□ 2.36
SMAD1-214ENST00000514831 CELF1Q92879 486 aaKnown RBP29.8■■■□□ 2.36
SMAD1-214ENST00000514831 MYBBP1AQ9BQG0 1328 aaKnown RBP29.79■■■□□ 2.36
SMAD1-214ENST00000514831 ZNF428Q96B54 188 aa29.79■■■□□ 2.36
SMAD1-214ENST00000514831 DBF4Q9UBU7 674 aaPredicted RBP29.79■■■□□ 2.36
SMAD1-214ENST00000514831 LAS1LQ9Y4W2 734 aaKnown RBP29.79■■■□□ 2.36
SMAD1-214ENST00000514831 RUNDC1Q96C34 613 aa29.78■■■□□ 2.36
SMAD1-214ENST00000514831 FAM89AQ96GI7 184 aa29.78■■■□□ 2.36
SMAD1-214ENST00000514831 NSFL1CQ9UNZ2 370 aaKnown RBP29.78■■■□□ 2.36
SMAD1-214ENST00000514831 ZBTB12Q9Y330 459 aaPredicted RBP29.78■■■□□ 2.36
SMAD1-214ENST00000514831 PSMD14O00487 310 aa29.77■■■□□ 2.36
SMAD1-214ENST00000514831 FAM161AQ3B820 660 aa29.77■■■□□ 2.36
SMAD1-214ENST00000514831 DBNDD1Q9H9R9 158 aa29.77■■■□□ 2.36
SMAD1-214ENST00000514831 CASP8AP2Q9UKL3 1982 aa29.77■■■□□ 2.36
SMAD1-214ENST00000514831 POLR2AP24928 1970 aaKnown RBP29.75■■■□□ 2.35
SMAD1-214ENST00000514831 ATP5J2-PTCD1G3V325 749 aa29.75■■■□□ 2.35
SMAD1-214ENST00000514831 RPS12P25398 132 aaKnown RBP29.75■■■□□ 2.35
SMAD1-214ENST00000514831 NOGQ13253 232 aa29.75■■■□□ 2.35
SMAD1-214ENST00000514831 USP48Q86UV5 1035 aa29.75■■■□□ 2.35
SMAD1-214ENST00000514831 POLLQ9UGP5 575 aa29.75■■■□□ 2.35
SMAD1-214ENST00000514831 SCN9AQ15858 1988 aa29.75■■■□□ 2.35
SMAD1-214ENST00000514831 CCDC85CA6NKD9 419 aa29.74■■■□□ 2.35
SMAD1-214ENST00000514831 GPSM2P81274 684 aa29.74■■■□□ 2.35
SMAD1-214ENST00000514831 SAMD7Q7Z3H4 446 aa29.74■■■□□ 2.35
SMAD1-214ENST00000514831 HYPKQ9NX55 129 aa29.74■■■□□ 2.35
SMAD1-214ENST00000514831 C6orf229H3BNL8 230 aa29.73■■■□□ 2.35
SMAD1-214ENST00000514831 TRIM28Q13263 835 aaKnown RBP29.73■■■□□ 2.35
SMAD1-214ENST00000514831 EYA3Q99504 573 aa29.73■■■□□ 2.35
SMAD1-214ENST00000514831 RTL9Q8NET4 1388 aa29.73■■■□□ 2.35
SMAD1-214ENST00000514831 RIMBP2O15034 1052 aa29.72■■■□□ 2.35
SMAD1-214ENST00000514831 ECE2O60344 883 aa29.72■■■□□ 2.35
SMAD1-214ENST00000514831 HUNKP57058 714 aa29.72■■■□□ 2.35
SMAD1-214ENST00000514831 PSME4Q14997 1843 aa29.71■■■□□ 2.35
SMAD1-214ENST00000514831 IRS4O14654 1257 aaPredicted RBP29.71■■■□□ 2.35
SMAD1-214ENST00000514831 EGFRP00533 1210 aa29.71■■■□□ 2.35
SMAD1-214ENST00000514831 WDR43Q15061 677 aaKnown RBP eCLIP29.71■■■□□ 2.35
SMAD1-214ENST00000514831 TBC1D10BQ4KMP7 808 aaPredicted RBP29.71■■■□□ 2.35
SMAD1-214ENST00000514831 KRT26Q7Z3Y9 468 aa29.71■■■□□ 2.35
SMAD1-214ENST00000514831 CFAP44Q96MT7 982 aa29.71■■■□□ 2.35
SMAD1-214ENST00000514831 RGS19P49795 217 aa29.7■■■□□ 2.35
SMAD1-214ENST00000514831 RTL5Q5HYW3 569 aaPredicted RBP29.7■■■□□ 2.35
SMAD1-214ENST00000514831 DUSP27Q5VZP5 1158 aa29.7■■■□□ 2.35
SMAD1-214ENST00000514831 DLK2Q6UY11 383 aa29.69■■■□□ 2.34
SMAD1-214ENST00000514831 TBC1D16Q8TBP0 767 aa29.69■■■□□ 2.34
SMAD1-214ENST00000514831 MCOLN1Q9GZU1 580 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms