RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
PHF3-211ENST00000514822 GTF3C2Q8WUA4 911 aaPredicted RBP8.91□□□□□ -0.98
PHF3-211ENST00000514822 DNAJB12Q9NXW2 375 aaKnown RBP8.91□□□□□ -0.98
PHF3-211ENST00000514822 ZFATQ9P243 1243 aa8.91□□□□□ -0.98
PHF3-211ENST00000514822 SLC6A14Q9UN76 642 aa8.91□□□□□ -0.98
PHF3-211ENST00000514822 ARID4AP29374 1257 aaPredicted RBP8.9□□□□□ -0.98
PHF3-211ENST00000514822 DHX32Q7L7V1 743 aaKnown RBP8.9□□□□□ -0.98
PHF3-211ENST00000514822 M0R082 166 aa8.89□□□□□ -0.99
PHF3-211ENST00000514822 ZBTB39O15060 712 aa8.89□□□□□ -0.99
PHF3-211ENST00000514822 ZNF417Q8TAU3 575 aa8.89□□□□□ -0.99
PHF3-211ENST00000514822 GPR152Q8TDT2 470 aa8.89□□□□□ -0.99
PHF3-211ENST00000514822 ZNF587Q96SQ5 575 aaPredicted RBP8.89□□□□□ -0.99
PHF3-211ENST00000514822 NOP53Q9NZM5 478 aaKnown RBP8.89□□□□□ -0.99
PHF3-211ENST00000514822 FNDC3AQ9Y2H6 1198 aaKnown RBP8.89□□□□□ -0.99
PHF3-211ENST00000514822 STARD13Q9Y3M8 1113 aa8.89□□□□□ -0.99
PHF3-211ENST00000514822 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
PHF3-211ENST00000514822 ALBP02768 609 aa8.88□□□□□ -0.99
PHF3-211ENST00000514822 NOM1Q5C9Z4 860 aaKnown RBP8.88□□□□□ -0.99
PHF3-211ENST00000514822 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
PHF3-211ENST00000514822 MPSTP25325 297 aa8.87□□□□□ -0.99
PHF3-211ENST00000514822 GPLD1P80108 840 aa8.87□□□□□ -0.99
PHF3-211ENST00000514822 TRIP4Q15650 581 aaPredicted RBP8.87□□□□□ -0.99
PHF3-211ENST00000514822 ALYREFQ86V81 257 aaKnown RBP8.87□□□□□ -0.99
PHF3-211ENST00000514822 NLRP13Q86W25 1043 aa8.87□□□□□ -0.99
PHF3-211ENST00000514822 TRPM4Q8TD43 1214 aa8.87□□□□□ -0.99
PHF3-211ENST00000514822 PRDM6Q9NQX0 595 aa8.87□□□□□ -0.99
PHF3-211ENST00000514822 PSAPP07602 524 aa8.86□□□□□ -0.99
PHF3-211ENST00000514822 ALKBH2Q6NS38 261 aa8.86□□□□□ -0.99
PHF3-211ENST00000514822 C20orf204Q6ZNR8 217 aa8.86□□□□□ -0.99
PHF3-211ENST00000514822 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
PHF3-211ENST00000514822 SUV39H2Q9H5I1 410 aa8.86□□□□□ -0.99
PHF3-211ENST00000514822 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
PHF3-211ENST00000514822 MMP20O60882 483 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 LILRB5O75023 590 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 ABL1P00519 1130 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 RPLP1P05386 114 aaKnown RBP8.85□□□□□ -0.99
PHF3-211ENST00000514822 PCSK2P16519 638 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 NRLP54845 237 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 PLAURQ03405 335 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
PHF3-211ENST00000514822 MTMR3Q13615 1198 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 PSAPL1Q6NUJ1 521 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 FAM35AQ86V20 835 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 NUDT16Q96DE0 195 aaKnown RBP8.85□□□□□ -0.99
PHF3-211ENST00000514822 DCAF5Q96JK2 942 aa8.85□□□□□ -0.99
PHF3-211ENST00000514822 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 ZBTB42B2RXF5 422 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 FAM13AO94988 1023 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 CPB1P15086 417 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 COL8A1P27658 744 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 EIF1AXP47813 144 aaKnown RBP8.84□□□□□ -0.99
PHF3-211ENST00000514822 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
PHF3-211ENST00000514822 C8orf86Q6ZUL3 223 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 NUDT8Q8WV74 236 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 EDEM1Q92611 657 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 PLVAPQ9BX97 442 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 JPH1Q9HDC5 661 aaPredicted RBP8.84□□□□□ -0.99
PHF3-211ENST00000514822 NAGPAQ9UK23 515 aa8.84□□□□□ -0.99
PHF3-211ENST00000514822 RGS9O75916 674 aaPredicted RBP8.83□□□□□ -1
PHF3-211ENST00000514822 NPR3P17342 541 aa8.83□□□□□ -1
PHF3-211ENST00000514822 SOX18P35713 384 aa8.83□□□□□ -1
PHF3-211ENST00000514822 MLLT1Q03111 559 aaPredicted RBP8.83□□□□□ -1
PHF3-211ENST00000514822 FRRS1LQ9P0K9 344 aa8.83□□□□□ -1
PHF3-211ENST00000514822 MZF1P28698 734 aaPredicted RBP8.82□□□□□ -1
PHF3-211ENST00000514822 DNM1Q05193 864 aaKnown RBP8.82□□□□□ -1
PHF3-211ENST00000514822 ZNF211Q13398 564 aaPredicted RBP8.82□□□□□ -1
PHF3-211ENST00000514822 AAMPQ13685 434 aa8.82□□□□□ -1
PHF3-211ENST00000514822 PDE12Q6L8Q7 609 aaKnown RBP8.82□□□□□ -1
PHF3-211ENST00000514822 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
PHF3-211ENST00000514822 TTC16Q8NEE8 873 aa8.82□□□□□ -1
PHF3-211ENST00000514822 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
PHF3-211ENST00000514822 EGFL7Q9UHF1 273 aa8.82□□□□□ -1
PHF3-211ENST00000514822 PDGFAP04085 211 aa8.81□□□□□ -1
PHF3-211ENST00000514822 NID1P14543 1247 aa8.81□□□□□ -1
PHF3-211ENST00000514822 COL9A3Q14050 684 aaPredicted RBP8.81□□□□□ -1
PHF3-211ENST00000514822 TTC39BQ5VTQ0 682 aaPredicted RBP8.81□□□□□ -1
PHF3-211ENST00000514822 ELMSAN1Q6PJG2 1045 aa8.81□□□□□ -1
PHF3-211ENST00000514822 HFE2Q6ZVN8 426 aa8.81□□□□□ -1
PHF3-211ENST00000514822 LPIN3Q9BQK8 851 aa8.81□□□□□ -1
PHF3-211ENST00000514822 ABI2Q9NYB9 513 aaPredicted RBP8.81□□□□□ -1
PHF3-211ENST00000514822 LOC102724428A0A0B4J2F2 783 aa8.8□□□□□ -1
PHF3-211ENST00000514822 GHRHP01286 108 aa8.8□□□□□ -1
PHF3-211ENST00000514822 HOXD8P13378 290 aaPredicted RBP8.8□□□□□ -1
PHF3-211ENST00000514822 EIF2AK2P19525 551 aaKnown RBP8.8□□□□□ -1
PHF3-211ENST00000514822 SIK1P57059 783 aa8.8□□□□□ -1
PHF3-211ENST00000514822 PERM1Q5SV97 790 aa8.8□□□□□ -1
PHF3-211ENST00000514822 ZNF438Q7Z4V0 828 aa8.8□□□□□ -1
PHF3-211ENST00000514822 OR13H1Q8NG92 308 aa8.8□□□□□ -1
PHF3-211ENST00000514822 NSUN5Q96P11 429 aaKnown RBP8.8□□□□□ -1
PHF3-211ENST00000514822 RBSNQ9H1K0 784 aa8.8□□□□□ -1
PHF3-211ENST00000514822 SERPINB4P48594 390 aa8.79□□□□□ -1
PHF3-211ENST00000514822 AFF1P51825 1210 aaKnown RBP8.79□□□□□ -1
PHF3-211ENST00000514822 PRRT3Q5FWE3 981 aa8.79□□□□□ -1
PHF3-211ENST00000514822 ELP3Q9H9T3 547 aa8.79□□□□□ -1
PHF3-211ENST00000514822 KRBA1A5PL33 1030 aa8.78□□□□□ -1
PHF3-211ENST00000514822 J3QW42 95 aa8.78□□□□□ -1
PHF3-211ENST00000514822 ICMTO60725 284 aa8.78□□□□□ -1
PHF3-211ENST00000514822 SPATA31C1P0DKV0 1188 aa8.78□□□□□ -1
PHF3-211ENST00000514822 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms