RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
USP46-209ENST00000514536 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
USP46-209ENST00000514536 FRAT1Q92837 279 aaPredicted RBP17.66■□□□□ 0.42
USP46-209ENST00000514536 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 GRM8O00222 908 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 CTSWP56202 376 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 TTLL11Q8NHH1 800 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
USP46-209ENST00000514536 SEC31BQ9NQW1 1179 aa17.65■□□□□ 0.42
USP46-209ENST00000514536 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
USP46-209ENST00000514536 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
USP46-209ENST00000514536 PLA2G12BQ9BX93 195 aa17.64■□□□□ 0.41
USP46-209ENST00000514536 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
USP46-209ENST00000514536 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
USP46-209ENST00000514536 PRELPP51888 382 aa17.63■□□□□ 0.41
USP46-209ENST00000514536 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
USP46-209ENST00000514536 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
USP46-209ENST00000514536 TMX4Q9H1E5 349 aaPredicted RBP17.63■□□□□ 0.41
USP46-209ENST00000514536 SP8Q8IXZ3 490 aa17.62■□□□□ 0.41
USP46-209ENST00000514536 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
USP46-209ENST00000514536 RNF181Q9P0P0 153 aa17.62■□□□□ 0.41
USP46-209ENST00000514536 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
USP46-209ENST00000514536 LMNB1P20700 586 aa17.62■□□□□ 0.41
USP46-209ENST00000514536 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
USP46-209ENST00000514536 GREM2Q9H772 168 aa17.62■□□□□ 0.41
USP46-209ENST00000514536 TNNQ9UQP3 1299 aa17.62■□□□□ 0.41
USP46-209ENST00000514536 LAMB2P55268 1798 aa17.61■□□□□ 0.41
USP46-209ENST00000514536 CSF1RP07333 972 aa17.61■□□□□ 0.41
USP46-209ENST00000514536 FOXO4P98177 505 aa17.61■□□□□ 0.41
USP46-209ENST00000514536 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
USP46-209ENST00000514536 EPHA10Q5JZY3 1008 aa17.61■□□□□ 0.41
USP46-209ENST00000514536 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
USP46-209ENST00000514536 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
USP46-209ENST00000514536 LTBP3Q9NS15 1303 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 TRIM27P14373 513 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 TMC4Q7Z404 712 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 SUCLG2Q96I99 432 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 CACNA1SQ13698 1873 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 UTYO14607 1347 aa17.6■□□□□ 0.41
USP46-209ENST00000514536 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
USP46-209ENST00000514536 ANKRD18AQ8IVF6 992 aa17.59■□□□□ 0.41
USP46-209ENST00000514536 ZNF277Q9NRM2 450 aaPredicted RBP17.59■□□□□ 0.41
USP46-209ENST00000514536 FAM161AQ3B820 660 aa17.58■□□□□ 0.41
USP46-209ENST00000514536 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.41
USP46-209ENST00000514536 MPNDQ8N594 471 aa17.58■□□□□ 0.41
USP46-209ENST00000514536 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.41
USP46-209ENST00000514536 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.41
USP46-209ENST00000514536 ITGA6P23229 1130 aa17.57■□□□□ 0.4
USP46-209ENST00000514536 INTS3Q68E01 1043 aaKnown RBP17.57■□□□□ 0.4
USP46-209ENST00000514536 ZNF526Q8TF50 670 aaPredicted RBP17.57■□□□□ 0.4
USP46-209ENST00000514536 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
USP46-209ENST00000514536 PSMD1Q99460 953 aa17.57■□□□□ 0.4
USP46-209ENST00000514536 GPBP1L1Q9HC44 474 aaPredicted RBP17.57■□□□□ 0.4
USP46-209ENST00000514536 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
USP46-209ENST00000514536 DPP8Q6V1X1 898 aaPredicted RBP17.57■□□□□ 0.4
USP46-209ENST00000514536 TAF1P21675 1872 aa17.57■□□□□ 0.4
USP46-209ENST00000514536 RTL9Q8NET4 1388 aa17.57■□□□□ 0.4
USP46-209ENST00000514536 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
USP46-209ENST00000514536 NSFL1CQ9UNZ2 370 aaKnown RBP17.56■□□□□ 0.4
USP46-209ENST00000514536 COL4A1P02462 1669 aa17.56■□□□□ 0.4
USP46-209ENST00000514536 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
USP46-209ENST00000514536 IARSP41252 1262 aaKnown RBP17.55■□□□□ 0.4
USP46-209ENST00000514536 GPSM2P81274 684 aa17.55■□□□□ 0.4
USP46-209ENST00000514536 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
USP46-209ENST00000514536 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
USP46-209ENST00000514536 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
USP46-209ENST00000514536 SUPT20HQ8NEM7 779 aa17.54■□□□□ 0.4
USP46-209ENST00000514536 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
USP46-209ENST00000514536 BICC1Q9H694 974 aaKnown RBP17.54■□□□□ 0.4
USP46-209ENST00000514536 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
USP46-209ENST00000514536 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
USP46-209ENST00000514536 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
USP46-209ENST00000514536 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
USP46-209ENST00000514536 TMEM57Q8N5G2 664 aa17.53■□□□□ 0.4
USP46-209ENST00000514536 ANKRD44Q8N8A2 993 aa17.53■□□□□ 0.4
USP46-209ENST00000514536 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
USP46-209ENST00000514536 MPHOSPH8Q99549 860 aa17.53■□□□□ 0.4
USP46-209ENST00000514536 MEIS3Q99687 375 aa17.53■□□□□ 0.4
USP46-209ENST00000514536 MINPP1Q9UNW1 487 aa17.53■□□□□ 0.4
USP46-209ENST00000514536 SBF1O95248 1867 aa17.52■□□□□ 0.4
USP46-209ENST00000514536 C6orf229H3BNL8 230 aa17.52■□□□□ 0.39
USP46-209ENST00000514536 PPIP5K2O43314 1243 aa17.52■□□□□ 0.39
USP46-209ENST00000514536 RLBP1P12271 317 aa17.52■□□□□ 0.39
USP46-209ENST00000514536 RABL6Q3YEC7 729 aaPredicted RBP17.52■□□□□ 0.39
USP46-209ENST00000514536 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.39
USP46-209ENST00000514536 ZNF594Q96JF6 807 aaPredicted RBP17.52■□□□□ 0.39
USP46-209ENST00000514536 ANKIB1Q9P2G1 1089 aa17.52■□□□□ 0.39
USP46-209ENST00000514536 POLLQ9UGP5 575 aa17.52■□□□□ 0.39
USP46-209ENST00000514536 AOC3Q16853 763 aa17.51■□□□□ 0.39
USP46-209ENST00000514536 TAF7LQ5H9L4 462 aa17.51■□□□□ 0.39
USP46-209ENST00000514536 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
USP46-209ENST00000514536 PLIN1O60240 522 aa17.5■□□□□ 0.39
USP46-209ENST00000514536 GNAI3P08754 354 aa17.5■□□□□ 0.39
USP46-209ENST00000514536 TBC1D16Q8TBP0 767 aa17.5■□□□□ 0.39
USP46-209ENST00000514536 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms