RNA–Protein interactions for RNA: ENST00000514348.1

TMEM173-213, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 705 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-213ENST00000514348 CCDC93Q567U6 631 aa16.31■□□□□ 0.2
TMEM173-213ENST00000514348 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
TMEM173-213ENST00000514348 ABCC4O15439 1325 aa16.3■□□□□ 0.2
TMEM173-213ENST00000514348 PDE8AO60658 829 aa16.3■□□□□ 0.2
TMEM173-213ENST00000514348 GCKRQ14397 625 aa16.3■□□□□ 0.2
TMEM173-213ENST00000514348 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
TMEM173-213ENST00000514348 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
TMEM173-213ENST00000514348 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
TMEM173-213ENST00000514348 CDHR2Q9BYE9 1310 aa16.29■□□□□ 0.2
TMEM173-213ENST00000514348 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
TMEM173-213ENST00000514348 SF3B3Q15393 1217 aaKnown RBP16.29■□□□□ 0.2
TMEM173-213ENST00000514348 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
TMEM173-213ENST00000514348 C7orf43Q8WVR3 580 aa16.29■□□□□ 0.2
TMEM173-213ENST00000514348 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
TMEM173-213ENST00000514348 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
TMEM173-213ENST00000514348 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
TMEM173-213ENST00000514348 LTBP3Q9NS15 1303 aa16.28■□□□□ 0.2
TMEM173-213ENST00000514348 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
TMEM173-213ENST00000514348 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
TMEM173-213ENST00000514348 GRAPQ13588 217 aa16.28■□□□□ 0.2
TMEM173-213ENST00000514348 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
TMEM173-213ENST00000514348 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
TMEM173-213ENST00000514348 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
TMEM173-213ENST00000514348 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
TMEM173-213ENST00000514348 H7C1W4 665 aa16.27■□□□□ 0.2
TMEM173-213ENST00000514348 ALDH1L1O75891 902 aa16.27■□□□□ 0.2
TMEM173-213ENST00000514348 CTSWP56202 376 aa16.27■□□□□ 0.2
TMEM173-213ENST00000514348 HTRA3P83110 453 aa16.27■□□□□ 0.2
TMEM173-213ENST00000514348 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
TMEM173-213ENST00000514348 RBM46Q8TBY0 533 aaKnown RBP16.27■□□□□ 0.2
TMEM173-213ENST00000514348 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
TMEM173-213ENST00000514348 BBOX1O75936 387 aa16.26■□□□□ 0.19
TMEM173-213ENST00000514348 CC2D2BQ6DHV5 1058 aa16.26■□□□□ 0.19
TMEM173-213ENST00000514348 API5Q9BZZ5 524 aaKnown RBP16.26■□□□□ 0.19
TMEM173-213ENST00000514348 ZNF277Q9NRM2 450 aaPredicted RBP16.26■□□□□ 0.19
TMEM173-213ENST00000514348 GRM8O00222 908 aa16.25■□□□□ 0.19
TMEM173-213ENST00000514348 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM173-213ENST00000514348 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
TMEM173-213ENST00000514348 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
TMEM173-213ENST00000514348 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
TMEM173-213ENST00000514348 COL4A5P29400 1685 aa16.24■□□□□ 0.19
TMEM173-213ENST00000514348 POTECB2RU33 542 aa16.24■□□□□ 0.19
TMEM173-213ENST00000514348 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
TMEM173-213ENST00000514348 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
TMEM173-213ENST00000514348 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
TMEM173-213ENST00000514348 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
TMEM173-213ENST00000514348 IPO8O15397 1037 aaKnown RBP16.23■□□□□ 0.19
TMEM173-213ENST00000514348 BCAR3O75815 825 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 CASP7P55210 303 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 TMC4Q7Z404 712 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 SP8Q8IXZ3 490 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
TMEM173-213ENST00000514348 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 CHMP3Q9Y3E7 222 aa16.23■□□□□ 0.19
TMEM173-213ENST00000514348 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
TMEM173-213ENST00000514348 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
TMEM173-213ENST00000514348 RPS8P62241 208 aaKnown RBP16.22■□□□□ 0.19
TMEM173-213ENST00000514348 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
TMEM173-213ENST00000514348 TTLL11Q8NHH1 800 aa16.22■□□□□ 0.19
TMEM173-213ENST00000514348 CDC5LQ99459 802 aaKnown RBP16.22■□□□□ 0.19
TMEM173-213ENST00000514348 GREM2Q9H772 168 aa16.22■□□□□ 0.19
TMEM173-213ENST00000514348 SCN4AP35499 1836 aa16.22■□□□□ 0.19
TMEM173-213ENST00000514348 COL4A1P02462 1669 aa16.21■□□□□ 0.19
TMEM173-213ENST00000514348 POTEIP0CG38 1075 aa16.21■□□□□ 0.19
TMEM173-213ENST00000514348 POTEJP0CG39 1038 aa16.21■□□□□ 0.19
TMEM173-213ENST00000514348 CCT4P50991 539 aaKnown RBP16.21■□□□□ 0.19
TMEM173-213ENST00000514348 APLP1P51693 650 aa16.21■□□□□ 0.19
TMEM173-213ENST00000514348 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
TMEM173-213ENST00000514348 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
TMEM173-213ENST00000514348 MPNDQ8N594 471 aa16.21■□□□□ 0.19
TMEM173-213ENST00000514348 FSTL1Q12841 308 aa16.2■□□□□ 0.18
TMEM173-213ENST00000514348 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
TMEM173-213ENST00000514348 ARHGAP45Q92619 1136 aa16.2■□□□□ 0.18
TMEM173-213ENST00000514348 PSMD1Q99460 953 aa16.2■□□□□ 0.18
TMEM173-213ENST00000514348 ITGA6P23229 1130 aa16.19■□□□□ 0.18
TMEM173-213ENST00000514348 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
TMEM173-213ENST00000514348 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
TMEM173-213ENST00000514348 SMC1BQ8NDV3 1235 aa16.19■□□□□ 0.18
TMEM173-213ENST00000514348 SUPT20HQ8NEM7 779 aa16.19■□□□□ 0.18
TMEM173-213ENST00000514348 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
TMEM173-213ENST00000514348 MYH3P11055 1940 aa16.19■□□□□ 0.18
TMEM173-213ENST00000514348 ANKRD18BA2A2Z9 1011 aa16.18■□□□□ 0.18
TMEM173-213ENST00000514348 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
TMEM173-213ENST00000514348 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
TMEM173-213ENST00000514348 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
TMEM173-213ENST00000514348 ATF7IPQ6VMQ6 1270 aa16.18■□□□□ 0.18
TMEM173-213ENST00000514348 LARGE2Q8N3Y3 721 aa16.18■□□□□ 0.18
TMEM173-213ENST00000514348 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
TMEM173-213ENST00000514348 LRRC37AA6NMS7 1700 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 RTL9Q8NET4 1388 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 CSF1RP07333 972 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 TRIM27P14373 513 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 FOXO4P98177 505 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 IFIT5Q13325 482 aaKnown RBP16.17■□□□□ 0.18
TMEM173-213ENST00000514348 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
TMEM173-213ENST00000514348 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms