RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SLC24A1O60721 1099 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 FKTNO75072 461 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 CAMTA2O94983 1202 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 A1BGP04217 495 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 DZIP3Q86Y13 1208 aaKnown RBP4.51□□□□□ -1.69
CHD1-211ENST00000514344 RASAL3Q86YV0 1011 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 MICALL2Q8IY33 904 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 TTC28Q96AY4 2481 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 SNED1Q8TER0 1413 aa4.51□□□□□ -1.69
CHD1-211ENST00000514344 H7C1D1 291 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 TPTE2Q6XPS3 522 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 MOB2Q70IA6 237 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 DPF3Q92784 378 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 DCPSQ96C86 337 aaKnown RBP4.5□□□□□ -1.69
CHD1-211ENST00000514344 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.5□□□□□ -1.69
CHD1-211ENST00000514344 SCAF8Q9UPN6 1271 aaKnown RBP4.5□□□□□ -1.69
CHD1-211ENST00000514344 OTOP1Q7RTM1 612 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 NUTM1Q86Y26 1132 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 TTC5Q8N0Z6 440 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 TMEM106CQ9BVX2 250 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 RAPGEFL1Q9UHV5 662 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 ZNRF3Q9ULT6 936 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
CHD1-211ENST00000514344 KLRG2A4D1S0 409 aaPredicted RBP4.5□□□□□ -1.69
CHD1-211ENST00000514344 POTEB2H3BUK9 544 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 SLC4A8Q2Y0W8 1093 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 Q7L0L9 218 aa4.5□□□□□ -1.69
CHD1-211ENST00000514344 SPDYE1Q8NFV5 336 aaPredicted RBP4.5□□□□□ -1.69
CHD1-211ENST00000514344 RPGRQ92834 1020 aaKnown RBP4.5□□□□□ -1.69
CHD1-211ENST00000514344 ATXN8OSP0DMR3 200 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 IL6STP40189 918 aaPredicted RBP4.49□□□□□ -1.69
CHD1-211ENST00000514344 SULT6B1Q6IMI4 303 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 SULF1Q8IWU6 871 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 VSIG10Q8N0Z9 540 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 ZNF496Q96IT1 587 aaPredicted RBP4.49□□□□□ -1.69
CHD1-211ENST00000514344 PUS7Q96PZ0 661 aaKnown RBP4.49□□□□□ -1.69
CHD1-211ENST00000514344 TESK2Q96S53 571 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 GGA3Q9NZ52 723 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 ASTN2O75129 1339 aaPredicted RBP4.49□□□□□ -1.69
CHD1-211ENST00000514344 PRAMEF22A3QJZ6 481 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 COL9A1P20849 921 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD1-211ENST00000514344 DEFB123Q8N688 67 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 CARD14Q9BXL6 1004 aa4.49□□□□□ -1.69
CHD1-211ENST00000514344 WTIPA6NIX2 430 aaPredicted RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 UBE2Q2LH0YL09 131 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 PPEF1O14829 653 aaPredicted RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 CC2D2BQ6DHV5 1058 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 CDCA5Q96FF9 252 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 FAM163AQ96GL9 167 aaPredicted RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 PRDM6Q9NQX0 595 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 XIRP2A4UGR9 3374 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 DNAH12Q6ZR08 3092 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 RBBP6Q7Z6E9 1792 aaKnown RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 ABCC12Q96J65 1359 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 RNMTO43148 476 aaKnown RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 TTLL12Q14166 644 aaPredicted RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 TNIP1Q15025 636 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 PRAMEF18Q5VWM3 479 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 TMX4Q9H1E5 349 aaPredicted RBP4.48□□□□□ -1.69
CHD1-211ENST00000514344 ZNF652Q9Y2D9 606 aa4.48□□□□□ -1.69
CHD1-211ENST00000514344 CDHR2Q9BYE9 1310 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 YDJCA8MPS7 323 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 CD44P16070 742 aaKnown RBP4.47□□□□□ -1.69
CHD1-211ENST00000514344 CDAN1Q8IWY9 1227 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 CD99L2Q8TCZ2 262 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 PTPN22Q9Y2R2 807 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 CRY2Q49AN0 593 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 SLC9C1Q4G0N8 1177 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 MRC1P22897 1456 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 HEG1Q9ULI3 1381 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 PSMD14O00487 310 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 TM4SF4P48230 202 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 PRKG1Q13976 671 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 NOM1Q5C9Z4 860 aaKnown RBP4.47□□□□□ -1.69
CHD1-211ENST00000514344 ANGEL2Q5VTE6 544 aaKnown RBP4.47□□□□□ -1.69
CHD1-211ENST00000514344 ZNF790Q6PG37 636 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 CLEC4GQ6UXB4 293 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 DPP8Q6V1X1 898 aaPredicted RBP4.47□□□□□ -1.69
CHD1-211ENST00000514344 MAMSTRQ6ZN01 415 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 ARMC5Q96C12 935 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 ZNF333Q96JL9 665 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 EFCC1Q9HA90 598 aa4.47□□□□□ -1.69
CHD1-211ENST00000514344 ECM2O94769 699 aaPredicted RBP4.46□□□□□ -1.7
CHD1-211ENST00000514344 CAP1Q01518 475 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 SREBF2Q12772 1141 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 HLFQ16534 295 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 KIF4BQ2VIQ3 1234 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 DBNDD1Q9H9R9 158 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 KCNQ5Q9NR82 932 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 USP16Q9Y5T5 823 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 UBR2Q8IWV8 1755 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 HMOX1P09601 288 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 KIAA2012Q0VF49 1180 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 NGEFQ8N5V2 710 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 PRO3102Q9H379 93 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 STAP2Q9UGK3 403 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 STXBP5LQ9Y2K9 1186 aa4.46□□□□□ -1.7
CHD1-211ENST00000514344 GPTP24298 496 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms