RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 CTSWP56202 376 aa11.94□□□□□ -0.5
PDGFC-209ENST00000513664 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
PDGFC-209ENST00000513664 PRPF40BQ6NWY9 871 aaKnown RBP11.94□□□□□ -0.5
PDGFC-209ENST00000513664 ARFGEF1Q9Y6D6 1849 aa11.94□□□□□ -0.5
PDGFC-209ENST00000513664 RTL9Q8NET4 1388 aa11.93□□□□□ -0.5
PDGFC-209ENST00000513664 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDGFC-209ENST00000513664 CASP7P55210 303 aa11.93□□□□□ -0.5
PDGFC-209ENST00000513664 DZIP1LQ8IYY4 767 aaKnown RBP11.93□□□□□ -0.5
PDGFC-209ENST00000513664 GNAI3P08754 354 aa11.92□□□□□ -0.5
PDGFC-209ENST00000513664 GRAPQ13588 217 aa11.92□□□□□ -0.5
PDGFC-209ENST00000513664 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
PDGFC-209ENST00000513664 GRAPLQ8TC17 118 aaPredicted RBP11.92□□□□□ -0.5
PDGFC-209ENST00000513664 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
PDGFC-209ENST00000513664 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
PDGFC-209ENST00000513664 CSF1RP07333 972 aa11.91□□□□□ -0.5
PDGFC-209ENST00000513664 CCDC93Q567U6 631 aa11.91□□□□□ -0.5
PDGFC-209ENST00000513664 RTKN2Q8IZC4 609 aa11.91□□□□□ -0.5
PDGFC-209ENST00000513664 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
PDGFC-209ENST00000513664 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
PDGFC-209ENST00000513664 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
PDGFC-209ENST00000513664 CHMP4BQ9H444 224 aaKnown RBP11.91□□□□□ -0.5
PDGFC-209ENST00000513664 MYH3P11055 1940 aa11.91□□□□□ -0.5
PDGFC-209ENST00000513664 C21orf2O43822 256 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 NBPF7P0C2Y1 421 aaPredicted RBP11.9□□□□□ -0.5
PDGFC-209ENST00000513664 UBTFL1P0CB47 393 aaPredicted RBP11.9□□□□□ -0.5
PDGFC-209ENST00000513664 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
PDGFC-209ENST00000513664 FOXO4P98177 505 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 PDE3AQ14432 1141 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 ARHGAP27Q6ZUM4 889 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 C7orf43Q8WVR3 580 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
PDGFC-209ENST00000513664 SLX4Q8IY92 1834 aa11.89□□□□□ -0.51
PDGFC-209ENST00000513664 IFIT5Q13325 482 aaKnown RBP11.89□□□□□ -0.51
PDGFC-209ENST00000513664 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
PDGFC-209ENST00000513664 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
PDGFC-209ENST00000513664 SP8Q8IXZ3 490 aa11.89□□□□□ -0.51
PDGFC-209ENST00000513664 LTBP3Q9NS15 1303 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
PDGFC-209ENST00000513664 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
PDGFC-209ENST00000513664 LMBR1LQ6UX01 489 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 GREM2Q9H772 168 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 CACNA1SQ13698 1873 aa11.88□□□□□ -0.51
PDGFC-209ENST00000513664 GNAI2P04899 355 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 ITGA6P23229 1130 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
PDGFC-209ENST00000513664 PSMD1Q99460 953 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 MPHOSPH8Q99549 860 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
PDGFC-209ENST00000513664 SEC31BQ9NQW1 1179 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
PDGFC-209ENST00000513664 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
PDGFC-209ENST00000513664 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDGFC-209ENST00000513664 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
PDGFC-209ENST00000513664 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
PDGFC-209ENST00000513664 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
PDGFC-209ENST00000513664 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-209ENST00000513664 MEIS3Q99687 375 aa11.86□□□□□ -0.51
PDGFC-209ENST00000513664 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
PDGFC-209ENST00000513664 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
PDGFC-209ENST00000513664 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
PDGFC-209ENST00000513664 FER1L6Q2WGJ9 1857 aa11.85□□□□□ -0.51
PDGFC-209ENST00000513664 LMNB1P20700 586 aa11.85□□□□□ -0.51
PDGFC-209ENST00000513664 MVPQ14764 893 aaKnown RBP11.85□□□□□ -0.51
PDGFC-209ENST00000513664 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
PDGFC-209ENST00000513664 DPP8Q6V1X1 898 aaPredicted RBP11.85□□□□□ -0.51
PDGFC-209ENST00000513664 MPNDQ8N594 471 aa11.85□□□□□ -0.51
PDGFC-209ENST00000513664 PANK1Q8TE04 598 aa11.85□□□□□ -0.51
PDGFC-209ENST00000513664 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
PDGFC-209ENST00000513664 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
PDGFC-209ENST00000513664 ZC3H4Q9UPT8 1303 aaKnown RBP11.85□□□□□ -0.51
PDGFC-209ENST00000513664 NFKBIEO00221 500 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
PDGFC-209ENST00000513664 PLIN1O60240 522 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 RLBP1P12271 317 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 RRP1P56182 461 aaKnown RBP11.84□□□□□ -0.51
PDGFC-209ENST00000513664 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 RTFDC1Q9BY42 306 aaPredicted RBP11.84□□□□□ -0.51
PDGFC-209ENST00000513664 ANKRD2Q9GZV1 360 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 SNED1Q8TER0 1413 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 CHD4Q14839 1912 aa11.84□□□□□ -0.51
PDGFC-209ENST00000513664 MTX1Q13505 466 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 EYA3Q99504 573 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 NSFL1CQ9UNZ2 370 aaKnown RBP11.83□□□□□ -0.52
PDGFC-209ENST00000513664 XDHP47989 1333 aa11.83□□□□□ -0.52
PDGFC-209ENST00000513664 RASSF7Q02833 373 aa11.82□□□□□ -0.52
PDGFC-209ENST00000513664 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
PDGFC-209ENST00000513664 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms