RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ALDH1L1O75891 902 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 MS4A1P11836 297 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 PTGER2P43116 358 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 DDR1Q08345 913 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 CWF19L2Q2TBE0 894 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 BEND3Q5T5X7 828 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 NLRP10Q86W26 655 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 NBPF5PQ86XG9 351 aaPredicted RBP9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 FTSJ3Q8IY81 847 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 SRCIN1Q9C0H9 1055 aa9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 CWC25Q9NXE8 425 aaPredicted RBP9.6□□□□□ -0.87
HMGXB3-204ENST00000513318 NPHP1O15259 732 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 NTSR2O95665 410 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 SERPINB2P05120 415 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 IGKV5-2P06315 115 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 CENPBP07199 599 aaPredicted RBP9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 ASTLQ6HA08 431 aaPredicted RBP9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 CNBD1Q8NA66 436 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 UTP14AQ9BVJ6 771 aaKnown RBP9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 A0A1B0GUL6 1792 aa9.59□□□□□ -0.87
HMGXB3-204ENST00000513318 SH3TC1Q8TE82 1336 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 ATN1P54259 1190 aaPredicted RBP9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 ST5P78524 1137 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 GCKRQ14397 625 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 SUSD4Q5VX71 490 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 PRR5LQ6MZQ0 368 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 TPTE2Q6XPS3 522 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 TRMT112Q9UI30 125 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 TNNQ9UQP3 1299 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
HMGXB3-204ENST00000513318 CDHR2Q9BYE9 1310 aa9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 CCDC88AQ3V6T2 1871 aa9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 GRM8O00222 908 aa9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 STK25O00506 426 aa9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 PELP1Q8IZL8 1130 aaKnown RBP9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
HMGXB3-204ENST00000513318 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 PLIN1O60240 522 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 RLBP1P12271 317 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 NUTM1Q86Y26 1132 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 TMEM57Q8N5G2 664 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 C9orf78Q9NZ63 289 aaPredicted RBP9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 LRRC37AA6NMS7 1700 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 UTYO14607 1347 aa9.56□□□□□ -0.88
HMGXB3-204ENST00000513318 H7C1W4 665 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 MVPQ14764 893 aaKnown RBP9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 UBE3BQ7Z3V4 1068 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 ITPRIPQ8IWB1 547 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 PANK1Q8TE04 598 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 FAM89AQ96GI7 184 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 PPP1R1BQ9UD71 204 aaPredicted RBP9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
HMGXB3-204ENST00000513318 IRS4O14654 1257 aaPredicted RBP9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 PDE8AO60658 829 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 PDE6BP35913 854 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 CASP7P55210 303 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 SLC10A5Q5PT55 438 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 PLA2G12BQ9BX93 195 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 USP44Q9H0E7 712 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 DDX19BQ9UMR2 479 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 HDAC5Q9UQL6 1122 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 CD2APQ9Y5K6 639 aa9.54□□□□□ -0.88
HMGXB3-204ENST00000513318 SBF1O95248 1867 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 CHD4Q14839 1912 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 MYH13Q9UKX3 1938 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 DICER1Q9UPY3 1922 aaKnown RBP9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 GNAI3P08754 354 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 NBPF7P0C2Y1 421 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 UBTFL1P0CB47 393 aaPredicted RBP9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 CRY2Q49AN0 593 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 C20orf194Q5TEA3 1177 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 SYNE4Q8N205 404 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 CCDC24Q8N4L8 307 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 NLRP3Q96P20 1036 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 MEIS3Q99687 375 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
HMGXB3-204ENST00000513318 KLRG2A4D1S0 409 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-204ENST00000513318 HCLS1P14317 486 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-204ENST00000513318 TGFB2P61812 414 aa9.52□□□□□ -0.89
HMGXB3-204ENST00000513318 FHDC1Q9C0D6 1143 aaPredicted RBP9.52□□□□□ -0.89
HMGXB3-204ENST00000513318 COL4A1P02462 1669 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms