RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 PLVAPQ9BX97 442 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 SUV39H2Q9H5I1 410 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 QTRT2Q9H974 415 aaKnown RBP4.45□□□□□ -1.7
SMN1-208ENST00000513228 JPH1Q9HDC5 661 aaPredicted RBP4.45□□□□□ -1.7
SMN1-208ENST00000513228 ZMIZ1Q9ULJ6 1067 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 USP20Q9Y2K6 914 aa4.45□□□□□ -1.7
SMN1-208ENST00000513228 SASH3O75995 380 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 APBA3O96018 575 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 CPB1P15086 417 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 MLLT1Q03111 559 aaPredicted RBP4.44□□□□□ -1.7
SMN1-208ENST00000513228 AAMPQ13685 434 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 C16orf46Q6P387 395 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 MICALL1Q8N3F8 863 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 C7orf43Q8WVR3 580 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 HCN2Q9UL51 889 aa4.44□□□□□ -1.7
SMN1-208ENST00000513228 LILRB5O75023 590 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 PTCD1O75127 700 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 RGS9O75916 674 aaPredicted RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 ATG7O95352 703 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 ATP2B4P23634 1241 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 BRD2P25440 801 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 TARSP26639 723 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 DGKGP49619 791 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 KCNQ4P56696 695 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 TRIM28Q13263 835 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 ELOAQ14241 798 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 PCSK7Q16549 785 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 IER5Q5VY09 327 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 ELMSAN1Q6PJG2 1045 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 C8orf86Q6ZUL3 223 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 FAM35AQ86V20 835 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 GSX2Q9BZM3 304 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 DNAJB12Q9NXW2 375 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 SLC6A14Q9UN76 642 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 BCS1LQ9Y276 419 aa4.43□□□□□ -1.7
SMN1-208ENST00000513228 RTCBQ9Y3I0 505 aaKnown RBP4.43□□□□□ -1.7
SMN1-208ENST00000513228 ADARB2-AS1A8MUL3 147 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 XYLBO75191 536 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 EIF2AK2P19525 551 aaKnown RBP4.42□□□□□ -1.7
SMN1-208ENST00000513228 COX20Q5RI15 118 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 PSAPL1Q6NUJ1 521 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 POTEAQ6S8J7 498 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 LINC00114Q6XXX2 140 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 HFE2Q6ZVN8 426 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 CD163Q86VB7 1156 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 TNFRSF25Q93038 417 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 RBSNQ9H1K0 784 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 FAM13BQ9NYF5 915 aa4.42□□□□□ -1.7
SMN1-208ENST00000513228 SUPT5HO00267 1087 aaKnown RBP4.41□□□□□ -1.7
SMN1-208ENST00000513228 GHRHP01286 108 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 ALBP02768 609 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 PSAPP07602 524 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 INPP5BP32019 993 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 RAC1P63000 192 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 DHX32Q7L7V1 743 aaKnown RBP4.41□□□□□ -1.7
SMN1-208ENST00000513228 SAP130Q9H0E3 1048 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 CXXC1Q9P0U4 656 aaPredicted RBP4.41□□□□□ -1.7
SMN1-208ENST00000513228 LRFN2Q9ULH4 789 aa4.41□□□□□ -1.7
SMN1-208ENST00000513228 UBAP1LF5GYI3 381 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 SPATA31C1P0DKV0 1188 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 PCSK2P16519 638 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 TTC39BQ5VTQ0 682 aaPredicted RBP4.4□□□□□ -1.71
SMN1-208ENST00000513228 CAPN12Q6ZSI9 719 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 DMRTC2Q8IXT2 367 aaPredicted RBP4.4□□□□□ -1.71
SMN1-208ENST00000513228 GPR152Q8TDT2 470 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 TRIM11Q96F44 468 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 MYO19Q96H55 970 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 NSUN5Q96P11 429 aaKnown RBP4.4□□□□□ -1.71
SMN1-208ENST00000513228 EFCC1Q9HA90 598 aa4.4□□□□□ -1.71
SMN1-208ENST00000513228 FNDC3AQ9Y2H6 1198 aaKnown RBP4.4□□□□□ -1.71
SMN1-208ENST00000513228 FAM177BA6PVY3 158 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 ABL1P00519 1130 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 SCNN1AP37088 669 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 ZAP70P43403 619 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 LRP8Q14114 963 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 OCLNQ16625 522 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 C8orf34Q49A92 452 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 ERICH6Q7L0X2 663 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 ABTB2Q8N961 1025 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 CLP1Q92989 425 aaKnown RBP4.39□□□□□ -1.71
SMN1-208ENST00000513228 SPACA7Q96KW9 195 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 NACC1Q96RE7 527 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 STIM2Q9P246 746 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 DMGDHQ9UI17 866 aaKnown RBP4.39□□□□□ -1.71
SMN1-208ENST00000513228 USP21Q9UK80 565 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 MTMR7Q9Y216 660 aa4.39□□□□□ -1.71
SMN1-208ENST00000513228 COL17A1Q9UMD9 1497 aaPredicted RBP4.38□□□□□ -1.71
SMN1-208ENST00000513228 J3QW42 95 aa4.38□□□□□ -1.71
SMN1-208ENST00000513228 OPLAHO14841 1288 aa4.38□□□□□ -1.71
SMN1-208ENST00000513228 PPP1R15AO75807 674 aaPredicted RBP4.38□□□□□ -1.71
SMN1-208ENST00000513228 GATA4P43694 442 aa4.38□□□□□ -1.71
SMN1-208ENST00000513228 PLAURQ03405 335 aa4.38□□□□□ -1.71
SMN1-208ENST00000513228 DNM1Q05193 864 aaKnown RBP4.38□□□□□ -1.71
SMN1-208ENST00000513228 GRIK4Q16099 956 aa4.38□□□□□ -1.71
SMN1-208ENST00000513228 GDF6Q6KF10 455 aaPredicted RBP4.38□□□□□ -1.71
SMN1-208ENST00000513228 ETFBKMTQ8IXQ9 262 aa4.38□□□□□ -1.71
SMN1-208ENST00000513228 SMG9Q9H0W8 520 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms