RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CSF1RP07333 972 aa15.67■□□□□ 0.1
PDPN-210ENST00000513143 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
PDPN-210ENST00000513143 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
PDPN-210ENST00000513143 SAMD1Q6SPF0 538 aaPredicted RBP15.67■□□□□ 0.1
PDPN-210ENST00000513143 SIRT2Q8IXJ6 389 aa15.67■□□□□ 0.1
PDPN-210ENST00000513143 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
PDPN-210ENST00000513143 NPHP1O15259 732 aa15.66■□□□□ 0.1
PDPN-210ENST00000513143 CTSWP56202 376 aa15.66■□□□□ 0.1
PDPN-210ENST00000513143 ST5P78524 1137 aa15.66■□□□□ 0.1
PDPN-210ENST00000513143 LMBR1LQ6UX01 489 aa15.66■□□□□ 0.1
PDPN-210ENST00000513143 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
PDPN-210ENST00000513143 HDAC1Q13547 482 aaPredicted RBP15.65■□□□□ 0.1
PDPN-210ENST00000513143 CCDC24Q8N4L8 307 aa15.65■□□□□ 0.1
PDPN-210ENST00000513143 TTLL11Q8NHH1 800 aa15.65■□□□□ 0.1
PDPN-210ENST00000513143 ATF5Q9Y2D1 282 aaPredicted RBP15.65■□□□□ 0.1
PDPN-210ENST00000513143 TNRC6CQ9HCJ0 1690 aaKnown RBP15.64■□□□□ 0.09
PDPN-210ENST00000513143 PNMA6EA0A0J9YXQ4 647 aa15.64■□□□□ 0.09
PDPN-210ENST00000513143 SF3B3Q15393 1217 aaKnown RBP15.64■□□□□ 0.09
PDPN-210ENST00000513143 SSH3Q8TE77 659 aa15.64■□□□□ 0.09
PDPN-210ENST00000513143 NLRP3Q96P20 1036 aa15.64■□□□□ 0.09
PDPN-210ENST00000513143 SRGAP3O43295 1099 aa15.63■□□□□ 0.09
PDPN-210ENST00000513143 POLA2Q14181 598 aa15.63■□□□□ 0.09
PDPN-210ENST00000513143 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
PDPN-210ENST00000513143 BRIP1Q9BX63 1249 aa15.63■□□□□ 0.09
PDPN-210ENST00000513143 KLRG2A4D1S0 409 aaPredicted RBP15.62■□□□□ 0.09
PDPN-210ENST00000513143 HMMRO75330 724 aa15.62■□□□□ 0.09
PDPN-210ENST00000513143 POLD1P28340 1107 aa15.62■□□□□ 0.09
PDPN-210ENST00000513143 C3orf67Q6ZVT6 689 aa15.62■□□□□ 0.09
PDPN-210ENST00000513143 RWDD1Q9H446 243 aaPredicted RBP15.62■□□□□ 0.09
PDPN-210ENST00000513143 RTL9Q8NET4 1388 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 IGHDP01880 384 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
PDPN-210ENST00000513143 CCDC152Q4G0S7 254 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 GREM2Q9H772 168 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 CHMP3Q9Y3E7 222 aa15.61■□□□□ 0.09
PDPN-210ENST00000513143 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
PDPN-210ENST00000513143 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
PDPN-210ENST00000513143 CRY2Q49AN0 593 aa15.6■□□□□ 0.09
PDPN-210ENST00000513143 B4GALNT3Q6L9W6 998 aa15.6■□□□□ 0.09
PDPN-210ENST00000513143 CCDC85AQ96PX6 553 aaPredicted RBP15.6■□□□□ 0.09
PDPN-210ENST00000513143 C10orf71Q711Q0 1435 aa15.59■□□□□ 0.09
PDPN-210ENST00000513143 ITGA6P23229 1130 aa15.59■□□□□ 0.09
PDPN-210ENST00000513143 PDE6BP35913 854 aa15.59■□□□□ 0.09
PDPN-210ENST00000513143 PTGER2P43116 358 aa15.59■□□□□ 0.09
PDPN-210ENST00000513143 IFIT5Q13325 482 aaKnown RBP15.59■□□□□ 0.09
PDPN-210ENST00000513143 DCTPP1Q9H773 170 aa15.59■□□□□ 0.09
PDPN-210ENST00000513143 TAF1P21675 1872 aa15.59■□□□□ 0.09
PDPN-210ENST00000513143 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.08
PDPN-210ENST00000513143 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
PDPN-210ENST00000513143 SPON1Q9HCB6 807 aa15.58■□□□□ 0.08
PDPN-210ENST00000513143 COPRSQ9NQ92 184 aa15.58■□□□□ 0.08
PDPN-210ENST00000513143 NOP58Q9Y2X3 529 aaKnown RBP15.58■□□□□ 0.08
PDPN-210ENST00000513143 KDM2BQ8NHM5 1336 aa15.57■□□□□ 0.08
PDPN-210ENST00000513143 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
PDPN-210ENST00000513143 PDZRN3Q9UPQ7 1066 aa15.57■□□□□ 0.08
PDPN-210ENST00000513143 PA2G4Q9UQ80 394 aaKnown RBP15.57■□□□□ 0.08
PDPN-210ENST00000513143 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
PDPN-210ENST00000513143 SRGNP10124 158 aa15.56■□□□□ 0.08
PDPN-210ENST00000513143 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
PDPN-210ENST00000513143 DDX46Q7L014 1031 aaKnown RBP15.56■□□□□ 0.08
PDPN-210ENST00000513143 SMC5Q8IY18 1101 aa15.56■□□□□ 0.08
PDPN-210ENST00000513143 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
PDPN-210ENST00000513143 GCC1Q96CN9 775 aa15.56■□□□□ 0.08
PDPN-210ENST00000513143 COL4A1P02462 1669 aa15.55■□□□□ 0.08
PDPN-210ENST00000513143 SURF6O75683 361 aaKnown RBP15.55■□□□□ 0.08
PDPN-210ENST00000513143 TAF7LQ5H9L4 462 aa15.55■□□□□ 0.08
PDPN-210ENST00000513143 CENPQQ7L2Z9 268 aaPredicted RBP15.55■□□□□ 0.08
PDPN-210ENST00000513143 RPGRQ92834 1020 aaKnown RBP15.55■□□□□ 0.08
PDPN-210ENST00000513143 RBM17Q96I25 401 aaKnown RBP15.55■□□□□ 0.08
PDPN-210ENST00000513143 ZNF594Q96JF6 807 aaPredicted RBP15.55■□□□□ 0.08
PDPN-210ENST00000513143 CDC5LQ99459 802 aaKnown RBP15.55■□□□□ 0.08
PDPN-210ENST00000513143 FBXO3Q9UK99 471 aa15.55■□□□□ 0.08
PDPN-210ENST00000513143 SPEF2Q9C093 1822 aa15.55■□□□□ 0.08
PDPN-210ENST00000513143 LRP5O75197 1615 aa15.55■□□□□ 0.08
PDPN-210ENST00000513143 DLEC1Q9Y238 1755 aa15.55■□□□□ 0.08
PDPN-210ENST00000513143 CIAO1O76071 339 aa15.54■□□□□ 0.08
PDPN-210ENST00000513143 NPR1P16066 1061 aa15.54■□□□□ 0.08
PDPN-210ENST00000513143 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
PDPN-210ENST00000513143 CRAMP1Q96RY5 1269 aa15.54■□□□□ 0.08
PDPN-210ENST00000513143 EXOC6BQ9Y2D4 811 aa15.54■□□□□ 0.08
PDPN-210ENST00000513143 KIAA1551Q9HCM1 1747 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 H0YIN7 160 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 EYA2O00167 538 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 RAB11FIP3O75154 756 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
PDPN-210ENST00000513143 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDPN-210ENST00000513143 GRAPQ13588 217 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 C2CD5Q86YS7 1000 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 ANKRD18AQ8IVF6 992 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 GRAPLQ8TC17 118 aaPredicted RBP15.53■□□□□ 0.08
PDPN-210ENST00000513143 CELF1Q92879 486 aaKnown RBP15.53■□□□□ 0.08
PDPN-210ENST00000513143 MASTLQ96GX5 879 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 SIL1Q9H173 461 aa15.53■□□□□ 0.08
PDPN-210ENST00000513143 IGHMBP2P38935 993 aaKnown RBP15.52■□□□□ 0.08
PDPN-210ENST00000513143 TGFB2P61812 414 aa15.52■□□□□ 0.08
PDPN-210ENST00000513143 STYK1Q6J9G0 422 aa15.52■□□□□ 0.08
PDPN-210ENST00000513143 LDHAL6AQ6ZMR3 332 aa15.52■□□□□ 0.08
PDPN-210ENST00000513143 ATG9AQ7Z3C6 839 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms