RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
CDK7-209ENST00000512985 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
CDK7-209ENST00000512985 BCAR3O75815 825 aa16.09■□□□□ 0.17
CDK7-209ENST00000512985 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
CDK7-209ENST00000512985 PLA2G12BQ9BX93 195 aa16.09■□□□□ 0.17
CDK7-209ENST00000512985 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.16
CDK7-209ENST00000512985 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
CDK7-209ENST00000512985 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
CDK7-209ENST00000512985 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
CDK7-209ENST00000512985 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
CDK7-209ENST00000512985 ABCC4O15439 1325 aa16.08■□□□□ 0.16
CDK7-209ENST00000512985 JARID2Q92833 1246 aaPredicted RBP16.07■□□□□ 0.16
CDK7-209ENST00000512985 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
CDK7-209ENST00000512985 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
CDK7-209ENST00000512985 ANKRD18AQ8IVF6 992 aa16.06■□□□□ 0.16
CDK7-209ENST00000512985 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
CDK7-209ENST00000512985 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
CDK7-209ENST00000512985 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 UTYO14607 1347 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 GNAI3P08754 354 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 TRIM27P14373 513 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
CDK7-209ENST00000512985 CASP7P55210 303 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
CDK7-209ENST00000512985 INTS3Q68E01 1043 aaKnown RBP16.05■□□□□ 0.16
CDK7-209ENST00000512985 SP8Q8IXZ3 490 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 TTLL11Q8NHH1 800 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 C7orf43Q8WVR3 580 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
CDK7-209ENST00000512985 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
CDK7-209ENST00000512985 MYH3P11055 1940 aa16.04■□□□□ 0.16
CDK7-209ENST00000512985 CHD4Q14839 1912 aa16.04■□□□□ 0.16
CDK7-209ENST00000512985 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
CDK7-209ENST00000512985 LMNB1P20700 586 aa16.04■□□□□ 0.16
CDK7-209ENST00000512985 YY1P25490 414 aa16.04■□□□□ 0.16
CDK7-209ENST00000512985 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK7-209ENST00000512985 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
CDK7-209ENST00000512985 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
CDK7-209ENST00000512985 CSF1RP07333 972 aa16.03■□□□□ 0.16
CDK7-209ENST00000512985 CCDC57Q2TAC2 916 aa16.03■□□□□ 0.16
CDK7-209ENST00000512985 TAF7LQ5H9L4 462 aa16.03■□□□□ 0.16
CDK7-209ENST00000512985 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
CDK7-209ENST00000512985 PSMD1Q99460 953 aa16.03■□□□□ 0.16
CDK7-209ENST00000512985 MPHOSPH8Q99549 860 aa16.03■□□□□ 0.16
CDK7-209ENST00000512985 ZC3H4Q9UPT8 1303 aaKnown RBP16.02■□□□□ 0.16
CDK7-209ENST00000512985 NBPF7P0C2Y1 421 aaPredicted RBP16.02■□□□□ 0.16
CDK7-209ENST00000512985 ITGA6P23229 1130 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
CDK7-209ENST00000512985 MPNDQ8N594 471 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.16
CDK7-209ENST00000512985 USP44Q9H0E7 712 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 VPS33BQ9H267 617 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
CDK7-209ENST00000512985 GREM2Q9H772 168 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
CDK7-209ENST00000512985 C9orf131Q5VYM1 1079 aa16.01■□□□□ 0.15
CDK7-209ENST00000512985 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
CDK7-209ENST00000512985 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
CDK7-209ENST00000512985 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
CDK7-209ENST00000512985 NFKBIEO00221 500 aa16■□□□□ 0.15
CDK7-209ENST00000512985 FOXO4P98177 505 aa16■□□□□ 0.15
CDK7-209ENST00000512985 RASSF7Q02833 373 aa16■□□□□ 0.15
CDK7-209ENST00000512985 FAM161AQ3B820 660 aa16■□□□□ 0.15
CDK7-209ENST00000512985 SUCLG2Q96I99 432 aa16■□□□□ 0.15
CDK7-209ENST00000512985 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
CDK7-209ENST00000512985 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
CDK7-209ENST00000512985 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
CDK7-209ENST00000512985 JDP2Q8WYK2 163 aa15.99■□□□□ 0.15
CDK7-209ENST00000512985 EYA3Q99504 573 aa15.99■□□□□ 0.15
CDK7-209ENST00000512985 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
CDK7-209ENST00000512985 RABL6Q3YEC7 729 aaPredicted RBP15.98■□□□□ 0.15
CDK7-209ENST00000512985 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
CDK7-209ENST00000512985 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
CDK7-209ENST00000512985 NSFL1CQ9UNZ2 370 aaKnown RBP15.98■□□□□ 0.15
CDK7-209ENST00000512985 XDHP47989 1333 aa15.97■□□□□ 0.15
CDK7-209ENST00000512985 GNAI2P04899 355 aa15.97■□□□□ 0.15
CDK7-209ENST00000512985 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
CDK7-209ENST00000512985 TMEM57Q8N5G2 664 aa15.97■□□□□ 0.15
CDK7-209ENST00000512985 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
CDK7-209ENST00000512985 UTRNP46939 3433 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 LDHAL6AQ6ZMR3 332 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.15
CDK7-209ENST00000512985 CNNM1Q9NRU3 951 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 GGA1Q9UJY5 639 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 LRRC37AA6NMS7 1700 aa15.96■□□□□ 0.15
CDK7-209ENST00000512985 G3V3G9 751 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 C6orf229H3BNL8 230 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 PDE3AQ14432 1141 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 EPHA10Q5JZY3 1008 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 LARGE2Q8N3Y3 721 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 MEIS3Q99687 375 aa15.95■□□□□ 0.14
CDK7-209ENST00000512985 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms