RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 DDNO94850 711 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 HSPA1AP0DMV8 641 aaKnown RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 HSPA1BP0DMV9 641 aaKnown RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 VEGFAP15692 232 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 FKBP5Q13451 457 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
KDM3B-208ENST00000512928 MIER1Q8N108 512 aa8.33□□□□□ -1.08
KDM3B-208ENST00000512928 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
KDM3B-208ENST00000512928 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
KDM3B-208ENST00000512928 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 CWC25Q9NXE8 425 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-208ENST00000512928 DDX60Q8IY21 1712 aaKnown RBP8.32□□□□□ -1.08
KDM3B-208ENST00000512928 PPIP5K2O43314 1243 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 GRAPQ13588 217 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 DPP8Q6V1X1 898 aaPredicted RBP8.32□□□□□ -1.08
KDM3B-208ENST00000512928 KSR2Q6VAB6 950 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 G2E3Q7L622 706 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 CCDC191Q8NCU4 936 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 GRAPLQ8TC17 118 aaPredicted RBP8.32□□□□□ -1.08
KDM3B-208ENST00000512928 PSMD1Q99460 953 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 SPINK5Q9NQ38 1064 aaPredicted RBP8.32□□□□□ -1.08
KDM3B-208ENST00000512928 ATP6V0A2Q9Y487 856 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 GJA3Q9Y6H8 435 aa8.32□□□□□ -1.08
KDM3B-208ENST00000512928 ZNF541Q9H0D2 1346 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 BBOX1O75936 387 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 HSP90B1P14625 803 aaKnown RBP8.31□□□□□ -1.08
KDM3B-208ENST00000512928 EIF6P56537 245 aaKnown RBP8.31□□□□□ -1.08
KDM3B-208ENST00000512928 FSTL1Q12841 308 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 FLIIQ13045 1269 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 AOC3Q16853 763 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
KDM3B-208ENST00000512928 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 NIM1KQ8IY84 436 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 MPNDQ8N594 471 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 ZBTB38Q8NAP3 1195 aaPredicted RBP8.31□□□□□ -1.08
KDM3B-208ENST00000512928 SMC1BQ8NDV3 1235 aa8.31□□□□□ -1.08
KDM3B-208ENST00000512928 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
KDM3B-208ENST00000512928 ZNF521Q96K83 1311 aa8.3□□□□□ -1.08
KDM3B-208ENST00000512928 VAMP4O75379 141 aa8.3□□□□□ -1.08
KDM3B-208ENST00000512928 PCCAP05165 728 aaPredicted RBP8.3□□□□□ -1.08
KDM3B-208ENST00000512928 TRIM28Q13263 835 aaKnown RBP8.3□□□□□ -1.08
KDM3B-208ENST00000512928 CCDC152Q4G0S7 254 aa8.3□□□□□ -1.08
KDM3B-208ENST00000512928 EAPPQ56P03 285 aaPredicted RBP8.3□□□□□ -1.08
KDM3B-208ENST00000512928 SP8Q8IXZ3 490 aa8.3□□□□□ -1.08
KDM3B-208ENST00000512928 SUPT20HQ8NEM7 779 aa8.3□□□□□ -1.08
KDM3B-208ENST00000512928 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
KDM3B-208ENST00000512928 NSFL1CQ9UNZ2 370 aaKnown RBP8.3□□□□□ -1.08
KDM3B-208ENST00000512928 COL4A5P29400 1685 aa8.3□□□□□ -1.08
KDM3B-208ENST00000512928 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 C6orf229H3BNL8 230 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 PDE8AO60658 829 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 IGKV5-2P06315 115 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 LMOD1P29536 600 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-208ENST00000512928 SF3B3Q15393 1217 aaKnown RBP8.29□□□□□ -1.08
KDM3B-208ENST00000512928 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 DNAAF4Q8WXU2 420 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 CLEC11AQ9Y240 323 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
KDM3B-208ENST00000512928 TAF1P21675 1872 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 F6X3S4 739 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 G3V3G9 751 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 FZD9O00144 591 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 CTSWP56202 376 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 RPS8P62241 208 aaKnown RBP8.28□□□□□ -1.08
KDM3B-208ENST00000512928 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.086e-7■□□□□ 8.7
KDM3B-208ENST00000512928 DCAF8Q5TAQ9 597 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 GPC2Q8N158 579 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 HACL1Q9UJ83 578 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 PCNTO95613 3336 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 LTBP1Q14766 1721 aa8.28□□□□□ -1.08
KDM3B-208ENST00000512928 COL4A1P02462 1669 aa8.27□□□□□ -1.08
KDM3B-208ENST00000512928 E9PSI1 815 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 EPHX2P34913 555 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 GPSM2P81274 684 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 WASHC4Q2M389 1173 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 ANKRD18AQ8IVF6 992 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 LINS1Q8NG48 757 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 GPR101Q96P66 508 aaPredicted RBP8.27□□□□□ -1.09
KDM3B-208ENST00000512928 ZNRF3Q9ULT6 936 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 CDHR2Q9BYE9 1310 aa8.27□□□□□ -1.09
KDM3B-208ENST00000512928 LRRC37AA6NMS7 1700 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 FOXN1O15353 648 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 RAD17O75943 681 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 UFL1O94874 794 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 GCKRQ14397 625 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 CHADLQ6NUI6 762 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
KDM3B-208ENST00000512928 L3MBTL3Q96JM7 780 aaPredicted RBP8.26□□□□□ -1.09
KDM3B-208ENST00000512928 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms