RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 ANKRD7Q92527 254 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 SPATA32Q96LK8 384 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
SNX25-205ENST00000512853 ZNF75DP51815 510 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 KRT32Q14532 448 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 ANO6Q4KMQ2 910 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 FAM173BQ6P4H8 233 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
SNX25-205ENST00000512853 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNX25-205ENST00000512853 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
SNX25-205ENST00000512853 CDC25BP30305 580 aa13.69□□□□□ -0.22
SNX25-205ENST00000512853 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
SNX25-205ENST00000512853 UTP14CQ5TAP6 766 aaKnown RBP13.69□□□□□ -0.22
SNX25-205ENST00000512853 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
SNX25-205ENST00000512853 GTF3C6Q969F1 213 aa13.69□□□□□ -0.22
SNX25-205ENST00000512853 TAF5LO75529 589 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 CAVIN2O95810 425 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 CAMK4Q16566 473 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 ZNF589Q86UQ0 364 aaPredicted RBP13.68□□□□□ -0.22
SNX25-205ENST00000512853 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
SNX25-205ENST00000512853 BOLA2Q9H3K6 86 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 GOLGA6L4A6NEF3 574 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 SYCP1Q15431 976 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 PGBD1Q96JS3 809 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 TCEANC2Q96MN5 208 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 ARID3AQ99856 593 aa13.68□□□□□ -0.22
SNX25-205ENST00000512853 COL15A1P39059 1388 aa13.67□□□□□ -0.22
SNX25-205ENST00000512853 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
SNX25-205ENST00000512853 DMTNQ08495 405 aa13.67□□□□□ -0.22
SNX25-205ENST00000512853 PDIA6Q15084 440 aa13.67□□□□□ -0.22
SNX25-205ENST00000512853 AFDNP55196 1824 aaKnown RBP13.66□□□□□ -0.22
SNX25-205ENST00000512853 ATP5JP18859 108 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 ZNF609O15014 1411 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 NR1I2O75469 434 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 SARM1Q6SZW1 724 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 BRF1Q92994 677 aa13.66□□□□□ -0.22
SNX25-205ENST00000512853 ZSCAN16Q9H4T2 348 aaPredicted RBP13.66□□□□□ -0.22
SNX25-205ENST00000512853 TFIP11Q9UBB9 837 aaKnown RBP13.66□□□□□ -0.22
SNX25-205ENST00000512853 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
SNX25-205ENST00000512853 TRPM3Q9HCF6 1732 aaPredicted RBP13.65□□□□□ -0.22
SNX25-205ENST00000512853 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 JAK2O60674 1132 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SNX25-205ENST00000512853 ZSCAN20P17040 1043 aaPredicted RBP13.64□□□□□ -0.23
SNX25-205ENST00000512853 ZNF165P49910 485 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
SNX25-205ENST00000512853 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
SNX25-205ENST00000512853 LRMPQ12912 555 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 STK3Q13188 491 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 GCKRQ14397 625 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 SIL1Q9H173 461 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 DNAJC25Q9H1X3 360 aa13.64□□□□□ -0.23
SNX25-205ENST00000512853 ABCC6O95255 1503 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 CTAGE5O15320 804 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 IQCB1Q15051 598 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 EPHA10Q5JZY3 1008 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 NAA16Q6N069 864 aaPredicted RBP13.63□□□□□ -0.23
SNX25-205ENST00000512853 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 DBNLQ9UJU6 430 aaKnown RBP13.63□□□□□ -0.23
SNX25-205ENST00000512853 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
SNX25-205ENST00000512853 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 Q6ZUG5 572 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 DRC7Q8IY82 874 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
SNX25-205ENST00000512853 GTPBP4Q9BZE4 634 aaKnown RBP13.62□□□□□ -0.23
SNX25-205ENST00000512853 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 PFKFB2O60825 505 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 ADD1P35611 737 aaKnown RBP13.62□□□□□ -0.23
SNX25-205ENST00000512853 NCBP1Q09161 790 aaKnown RBP13.62□□□□□ -0.23
SNX25-205ENST00000512853 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
SNX25-205ENST00000512853 MRFAP1L1Q96HT8 127 aa13.62□□□□□ -0.23
SNX25-205ENST00000512853 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms