RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 RWDD1Q9H446 243 aaPredicted RBP22.37■■□□□ 1.17
NME1-210ENST00000512768 C3orf67Q6ZVT6 689 aa22.36■■□□□ 1.17
NME1-210ENST00000512768 NLRP3Q96P20 1036 aa22.36■■□□□ 1.17
NME1-210ENST00000512768 RIC1Q4ADV7 1423 aa22.36■■□□□ 1.17
NME1-210ENST00000512768 TNRC6CQ9HCJ0 1690 aaKnown RBP22.36■■□□□ 1.17
NME1-210ENST00000512768 IGHDP01880 384 aa22.35■■□□□ 1.17
NME1-210ENST00000512768 POLA2Q14181 598 aa22.35■■□□□ 1.17
NME1-210ENST00000512768 SSH3Q8TE77 659 aa22.35■■□□□ 1.17
NME1-210ENST00000512768 POLD1P28340 1107 aa22.34■■□□□ 1.17
NME1-210ENST00000512768 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
NME1-210ENST00000512768 FAM161AQ3B820 660 aa22.34■■□□□ 1.17
NME1-210ENST00000512768 CCDC152Q4G0S7 254 aa22.34■■□□□ 1.17
NME1-210ENST00000512768 GREM2Q9H772 168 aa22.34■■□□□ 1.17
NME1-210ENST00000512768 ANKRD31Q8N7Z5 1873 aa22.33■■□□□ 1.17
NME1-210ENST00000512768 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.17
NME1-210ENST00000512768 CCDC57Q2TAC2 916 aa22.32■■□□□ 1.16
NME1-210ENST00000512768 RTL9Q8NET4 1388 aa22.31■■□□□ 1.16
NME1-210ENST00000512768 RFX5P48382 616 aaPredicted RBP22.31■■□□□ 1.16
NME1-210ENST00000512768 IFIT5Q13325 482 aaKnown RBP22.31■■□□□ 1.16
NME1-210ENST00000512768 ANKRD18BA2A2Z9 1011 aa22.3■■□□□ 1.16
NME1-210ENST00000512768 ITGA6P23229 1130 aa22.3■■□□□ 1.16
NME1-210ENST00000512768 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
NME1-210ENST00000512768 PDE6BP35913 854 aa22.29■■□□□ 1.16
NME1-210ENST00000512768 TAF7LQ5H9L4 462 aa22.29■■□□□ 1.16
NME1-210ENST00000512768 KLHDC4Q8TBB5 520 aa22.29■■□□□ 1.16
NME1-210ENST00000512768 SURF6O75683 361 aaKnown RBP22.28■■□□□ 1.16
NME1-210ENST00000512768 PTPN12Q05209 780 aaKnown RBP22.28■■□□□ 1.16
NME1-210ENST00000512768 RPGRQ92834 1020 aaKnown RBP22.28■■□□□ 1.16
NME1-210ENST00000512768 ZNF594Q96JF6 807 aaPredicted RBP22.28■■□□□ 1.16
NME1-210ENST00000512768 SGIP1Q9BQI5 828 aa22.28■■□□□ 1.16
NME1-210ENST00000512768 DCTPP1Q9H773 170 aa22.28■■□□□ 1.16
NME1-210ENST00000512768 COPRSQ9NQ92 184 aa22.28■■□□□ 1.16
NME1-210ENST00000512768 SEC31BQ9NQW1 1179 aa22.28■■□□□ 1.16
NME1-210ENST00000512768 C10orf71Q711Q0 1435 aa22.28■■□□□ 1.16
NME1-210ENST00000512768 KDM2BQ8NHM5 1336 aa22.28■■□□□ 1.16
NME1-210ENST00000512768 KLRG2A4D1S0 409 aaPredicted RBP22.27■■□□□ 1.16
NME1-210ENST00000512768 PTGER2P43116 358 aa22.27■■□□□ 1.16
NME1-210ENST00000512768 CRY2Q49AN0 593 aa22.27■■□□□ 1.16
NME1-210ENST00000512768 CENPQQ7L2Z9 268 aaPredicted RBP22.27■■□□□ 1.16
NME1-210ENST00000512768 EXOC6BQ9Y2D4 811 aa22.27■■□□□ 1.16
NME1-210ENST00000512768 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
NME1-210ENST00000512768 GCC1Q96CN9 775 aa22.26■■□□□ 1.15
NME1-210ENST00000512768 SIL1Q9H173 461 aa22.26■■□□□ 1.15
NME1-210ENST00000512768 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
NME1-210ENST00000512768 NOP58Q9Y2X3 529 aaKnown RBP22.26■■□□□ 1.15
NME1-210ENST00000512768 SMC5Q8IY18 1101 aa22.25■■□□□ 1.15
NME1-210ENST00000512768 CDC5LQ99459 802 aaKnown RBP22.25■■□□□ 1.15
NME1-210ENST00000512768 TAF1P21675 1872 aa22.25■■□□□ 1.15
NME1-210ENST00000512768 COL11A2P13942 1736 aaPredicted RBP22.24■■□□□ 1.15
NME1-210ENST00000512768 G3BP1Q13283 466 aaKnown RBP eCLIP22.24■■□□□ 1.151e-6■■■■■ 28.8
NME1-210ENST00000512768 OS9Q13438 667 aaPredicted RBP22.24■■□□□ 1.15
NME1-210ENST00000512768 C2CD5Q86YS7 1000 aa22.24■■□□□ 1.15
NME1-210ENST00000512768 RBM17Q96I25 401 aaKnown RBP22.24■■□□□ 1.15
NME1-210ENST00000512768 SPEF2Q9C093 1822 aa22.23■■□□□ 1.15
NME1-210ENST00000512768 APBB1O00213 710 aa22.23■■□□□ 1.15
NME1-210ENST00000512768 SRGNP10124 158 aa22.23■■□□□ 1.15
NME1-210ENST00000512768 HOXA10P31260 410 aaPredicted RBP22.23■■□□□ 1.15
NME1-210ENST00000512768 IGHMBP2P38935 993 aaKnown RBP22.23■■□□□ 1.15
NME1-210ENST00000512768 HSP90AB4PQ58FF6 505 aa22.23■■□□□ 1.15
NME1-210ENST00000512768 ANKRD18AQ8IVF6 992 aa22.23■■□□□ 1.15
NME1-210ENST00000512768 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
NME1-210ENST00000512768 H0YIN7 160 aa22.22■■□□□ 1.15
NME1-210ENST00000512768 EYA2O00167 538 aa22.22■■□□□ 1.15
NME1-210ENST00000512768 NPR1P16066 1061 aa22.22■■□□□ 1.15
NME1-210ENST00000512768 CELF1Q92879 486 aaKnown RBP22.22■■□□□ 1.15
NME1-210ENST00000512768 PUS3Q9BZE2 481 aaKnown RBP22.22■■□□□ 1.15
NME1-210ENST00000512768 PDZRN3Q9UPQ7 1066 aa22.22■■□□□ 1.15
NME1-210ENST00000512768 COL4A1P02462 1669 aa22.22■■□□□ 1.15
NME1-210ENST00000512768 RAB11FIP3O75154 756 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 RPS8P62241 208 aaKnown RBP22.21■■□□□ 1.15
NME1-210ENST00000512768 GRAPQ13588 217 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 LRRC24Q50LG9 513 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 LDHAL6AQ6ZMR3 332 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 GRAPLQ8TC17 118 aaPredicted RBP22.21■■□□□ 1.15
NME1-210ENST00000512768 CRAMP1Q96RY5 1269 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 MPHOSPH8Q99549 860 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 CNNM1Q9NRU3 951 aa22.21■■□□□ 1.15
NME1-210ENST00000512768 LRP5O75197 1615 aa22.2■■□□□ 1.15
NME1-210ENST00000512768 CIAO1O76071 339 aa22.2■■□□□ 1.14
NME1-210ENST00000512768 CHRNA5P30532 468 aa22.2■■□□□ 1.14
NME1-210ENST00000512768 MASTLQ96GX5 879 aa22.2■■□□□ 1.14
NME1-210ENST00000512768 FBXO3Q9UK99 471 aa22.2■■□□□ 1.14
NME1-210ENST00000512768 IL15P40933 162 aaPredicted RBP22.19■■□□□ 1.14
NME1-210ENST00000512768 ANKRD45Q5TZF3 282 aa22.19■■□□□ 1.14
NME1-210ENST00000512768 ATG9AQ7Z3C6 839 aa22.19■■□□□ 1.14
NME1-210ENST00000512768 ERC1Q8IUD2 1116 aa22.19■■□□□ 1.14
NME1-210ENST00000512768 KLHL34Q8N239 644 aa22.19■■□□□ 1.14
NME1-210ENST00000512768 ZNF622Q969S3 477 aaKnown RBP eCLIP22.19■■□□□ 1.14
NME1-210ENST00000512768 PPP1R1BQ9UD71 204 aaPredicted RBP22.19■■□□□ 1.14
NME1-210ENST00000512768 STYK1Q6J9G0 422 aa22.18■■□□□ 1.14
NME1-210ENST00000512768 RIPOR2Q9Y4F9 1068 aa22.18■■□□□ 1.14
NME1-210ENST00000512768 SASH1O94885 1247 aa22.17■■□□□ 1.14
NME1-210ENST00000512768 NUCB1Q02818 461 aa22.17■■□□□ 1.14
NME1-210ENST00000512768 RHPN1Q8TCX5 695 aa22.17■■□□□ 1.14
NME1-210ENST00000512768 KIF1BPQ96EK5 621 aa22.17■■□□□ 1.14
NME1-210ENST00000512768 LRRCC1Q9C099 1032 aa22.17■■□□□ 1.14
NME1-210ENST00000512768 BSDC1Q9NW68 430 aaPredicted RBP22.17■■□□□ 1.14
NME1-210ENST00000512768 ZBTB47Q9UFB7 747 aaPredicted RBP22.17■■□□□ 1.14
NME1-210ENST00000512768 CD2APQ9Y5K6 639 aa22.17■■□□□ 1.14
NME1-210ENST00000512768 SMARCA5O60264 1052 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms