RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 AAMPQ13685 434 aa13.03□□□□□ -0.32
LDB2-214ENST00000512345 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
LDB2-214ENST00000512345 SETDB2Q96T68 719 aa13.03□□□□□ -0.32
LDB2-214ENST00000512345 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
LDB2-214ENST00000512345 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
LDB2-214ENST00000512345 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
LDB2-214ENST00000512345 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.33
LDB2-214ENST00000512345 PDE6BP35913 854 aa13.02□□□□□ -0.33
LDB2-214ENST00000512345 RASSF7Q02833 373 aa13.02□□□□□ -0.33
LDB2-214ENST00000512345 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
LDB2-214ENST00000512345 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
LDB2-214ENST00000512345 PLBD2Q8NHP8 589 aa13.02□□□□□ -0.33
LDB2-214ENST00000512345 KDM2BQ8NHM5 1336 aa13.02□□□□□ -0.33
LDB2-214ENST00000512345 LMNB1P20700 586 aa13.01□□□□□ -0.33
LDB2-214ENST00000512345 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
LDB2-214ENST00000512345 CNBD1Q8NA66 436 aa13.01□□□□□ -0.33
LDB2-214ENST00000512345 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
LDB2-214ENST00000512345 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
LDB2-214ENST00000512345 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
LDB2-214ENST00000512345 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
LDB2-214ENST00000512345 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
LDB2-214ENST00000512345 NPHP1O15259 732 aa13□□□□□ -0.33
LDB2-214ENST00000512345 ST5P78524 1137 aa13□□□□□ -0.33
LDB2-214ENST00000512345 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
LDB2-214ENST00000512345 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
LDB2-214ENST00000512345 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
LDB2-214ENST00000512345 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
LDB2-214ENST00000512345 NFKBIEO00221 500 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 ALDH1L1O75891 902 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 PRELPP51888 382 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
LDB2-214ENST00000512345 LINS1Q8NG48 757 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
LDB2-214ENST00000512345 MYD88Q99836 296 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 BCORQ6W2J9 1755 aa12.99□□□□□ -0.33
LDB2-214ENST00000512345 SBF1O95248 1867 aa12.98□□□□□ -0.33
LDB2-214ENST00000512345 ANKRD31Q8N7Z5 1873 aa12.98□□□□□ -0.33
LDB2-214ENST00000512345 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
LDB2-214ENST00000512345 APLP1P51693 650 aa12.98□□□□□ -0.33
LDB2-214ENST00000512345 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
LDB2-214ENST00000512345 ARFGEF2Q9Y6D5 1785 aa12.98□□□□□ -0.33
LDB2-214ENST00000512345 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
LDB2-214ENST00000512345 C21orf2O43822 256 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 SRGNP10124 158 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 NBPF5PQ86XG9 351 aaPredicted RBP12.97□□□□□ -0.33
LDB2-214ENST00000512345 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 MEIS3Q99687 375 aa12.97□□□□□ -0.33
LDB2-214ENST00000512345 GLTPD2A6NH11 291 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 GNAI3P08754 354 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 FSTL1Q12841 308 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 TCIRG1Q13488 830 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 HLFQ16534 295 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 CWF19L2Q2TBE0 894 aaKnown RBP12.96□□□□□ -0.33
LDB2-214ENST00000512345 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
LDB2-214ENST00000512345 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.33
LDB2-214ENST00000512345 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
LDB2-214ENST00000512345 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.34
LDB2-214ENST00000512345 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
LDB2-214ENST00000512345 ATP5J2-PTCD1G3V325 749 aa12.95□□□□□ -0.34
LDB2-214ENST00000512345 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
LDB2-214ENST00000512345 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
LDB2-214ENST00000512345 TPTE2Q6XPS3 522 aa12.95□□□□□ -0.34
LDB2-214ENST00000512345 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
LDB2-214ENST00000512345 KLRG2A4D1S0 409 aaPredicted RBP12.94□□□□□ -0.34
LDB2-214ENST00000512345 UBTFL1P0CB47 393 aaPredicted RBP12.94□□□□□ -0.34
LDB2-214ENST00000512345 TRIM28Q13263 835 aaKnown RBP12.94□□□□□ -0.34
LDB2-214ENST00000512345 GCKRQ14397 625 aa12.94□□□□□ -0.34
LDB2-214ENST00000512345 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
LDB2-214ENST00000512345 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
LDB2-214ENST00000512345 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
LDB2-214ENST00000512345 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
LDB2-214ENST00000512345 NUP98P52948 1817 aa12.94□□□□□ -0.34
LDB2-214ENST00000512345 UTYO14607 1347 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 FAM177BA6PVY3 158 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 GRM8O00222 908 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 GNAI2P04899 355 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
LDB2-214ENST00000512345 NPR1P16066 1061 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
LDB2-214ENST00000512345 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
LDB2-214ENST00000512345 NBPF7P0C2Y1 421 aaPredicted RBP12.92□□□□□ -0.34
LDB2-214ENST00000512345 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
LDB2-214ENST00000512345 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
LDB2-214ENST00000512345 DNAJC5GQ8N7S2 189 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms