RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ZC3H15Q8WU90 426 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-217ENST00000512274 APAF1O14727 1248 aa13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 CRY2Q49AN0 593 aa13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 WDR63Q8IWG1 891 aa13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 ZNRF3Q9ULT6 936 aa13.59□□□□□ -0.23
PDLIM5-217ENST00000512274 GOLGA2Q08379 1002 aa13.58□□□□□ -0.24
PDLIM5-217ENST00000512274 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
PDLIM5-217ENST00000512274 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 H7C1D1 291 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 SAMD7Q7Z3H4 446 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 GTF3C3Q9Y5Q9 886 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 IL16Q14005 1332 aa13.57□□□□□ -0.24
PDLIM5-217ENST00000512274 NUP98P52948 1817 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 E9PSI1 815 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 TBC1D8O95759 1140 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 SLC10A3P09131 477 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 WWC1Q8IX03 1113 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 ZNF296Q8WUU4 475 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
PDLIM5-217ENST00000512274 HOXA10P31260 410 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-217ENST00000512274 TNIP1Q15025 636 aa13.55□□□□□ -0.24
PDLIM5-217ENST00000512274 TBC1D10BQ4KMP7 808 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-217ENST00000512274 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
PDLIM5-217ENST00000512274 TMX4Q9H1E5 349 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-217ENST00000512274 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-217ENST00000512274 DLL1O00548 723 aa13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 GPTP24298 496 aa13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 DCPSQ96C86 337 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 MAPK8IP3Q9UPT6 1336 aa13.54□□□□□ -0.24
PDLIM5-217ENST00000512274 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 EGFRP00533 1210 aa13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 SNRPA1P09661 255 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 TMPOP42166 694 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
PDLIM5-217ENST00000512274 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
PDLIM5-217ENST00000512274 NEFMP07197 916 aa13.52□□□□□ -0.25
PDLIM5-217ENST00000512274 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-217ENST00000512274 RASAL3Q86YV0 1011 aa13.52□□□□□ -0.25
PDLIM5-217ENST00000512274 ATP6V0A2Q9Y487 856 aa13.52□□□□□ -0.25
PDLIM5-217ENST00000512274 RIC1Q4ADV7 1423 aa13.52□□□□□ -0.25
PDLIM5-217ENST00000512274 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-217ENST00000512274 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
PDLIM5-217ENST00000512274 MPNDQ8N594 471 aa13.51□□□□□ -0.25
PDLIM5-217ENST00000512274 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
PDLIM5-217ENST00000512274 PAPPA2Q9BXP8 1791 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 GPR25O00155 361 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 NEFLP07196 543 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-217ENST00000512274 TAF1P21675 1872 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 UBN2Q6ZU65 1347 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 PSMD14O00487 310 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 RGL2O15211 777 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
PDLIM5-217ENST00000512274 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 TTLL7Q6ZT98 887 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 SULF1Q8IWU6 871 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 NLRP3Q96P20 1036 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
PDLIM5-217ENST00000512274 ABCC4O15439 1325 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 MOB2Q70IA6 237 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 DPF2Q92785 391 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 DBNDD1Q9H9R9 158 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 GGA3Q9NZ52 723 aa13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 RRP7AQ9Y3A4 280 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-217ENST00000512274 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms