RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 LMBRD1Q9NUN5 540 aa17.84■□□□□ 0.45
SNCAIP-216ENST00000512146 SPATA31A1Q5TZJ5 1347 aa17.84■□□□□ 0.45
SNCAIP-216ENST00000512146 CDHR2Q9BYE9 1310 aa17.84■□□□□ 0.45
SNCAIP-216ENST00000512146 WNK3Q9BYP7 1800 aa17.83■□□□□ 0.44
SNCAIP-216ENST00000512146 SLC27A2O14975 620 aa17.83■□□□□ 0.44
SNCAIP-216ENST00000512146 TAF5LO75529 589 aa17.83■□□□□ 0.44
SNCAIP-216ENST00000512146 HSP90AB3PQ58FF7 597 aa17.83■□□□□ 0.44
SNCAIP-216ENST00000512146 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.44
SNCAIP-216ENST00000512146 ZNF609O15014 1411 aa17.83■□□□□ 0.44
SNCAIP-216ENST00000512146 LRRC24Q50LG9 513 aa17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 NOL8Q76FK4 1167 aaKnown RBP17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 KBTBD3Q8NAB2 608 aa17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 ALDH8A1Q9H2A2 487 aaPredicted RBP17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 HMG20BQ9P0W2 317 aa17.82■□□□□ 0.44
SNCAIP-216ENST00000512146 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
SNCAIP-216ENST00000512146 RNF20Q5VTR2 975 aa17.81■□□□□ 0.44
SNCAIP-216ENST00000512146 NLRP10Q86W26 655 aa17.81■□□□□ 0.44
SNCAIP-216ENST00000512146 ZNF594Q96JF6 807 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-216ENST00000512146 ZSCAN31Q96LW9 406 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-216ENST00000512146 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
SNCAIP-216ENST00000512146 PSMA5P28066 241 aa17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 TIMM10P62072 90 aa17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 HLFQ16534 295 aa17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 ZBTB1Q9Y2K1 713 aa17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 NRAPQ86VF7 1730 aa17.8■□□□□ 0.44
SNCAIP-216ENST00000512146 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 FAM89AQ96GI7 184 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 CPA1P15085 419 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 KCNJ4P48050 445 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 DNAJC2Q99543 621 aaKnown RBP17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 CEP126Q9P2H0 1117 aa17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 DDX49Q9Y6V7 483 aaKnown RBP17.79■□□□□ 0.44
SNCAIP-216ENST00000512146 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
SNCAIP-216ENST00000512146 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
SNCAIP-216ENST00000512146 MRE11P49959 708 aa17.78■□□□□ 0.44
SNCAIP-216ENST00000512146 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
SNCAIP-216ENST00000512146 SPATA31A5Q5VU36 1347 aa17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 SPATA31A7Q8IWB4 1347 aa17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 DDB1Q16531 1140 aa17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 AKAP2Q9Y2D5 859 aa17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 NDUFB9Q9Y6M9 179 aa17.77■□□□□ 0.44
SNCAIP-216ENST00000512146 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.43
SNCAIP-216ENST00000512146 BARGINQ6ZT62 677 aa17.77■□□□□ 0.43
SNCAIP-216ENST00000512146 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.43
SNCAIP-216ENST00000512146 U3KPZ7 1027 aaPredicted RBP17.77■□□□□ 0.43
SNCAIP-216ENST00000512146 ADAMTS2O95450 1211 aa17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 LARGE1O95461 756 aa17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 KRT32Q14532 448 aa17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 SLIT2O94813 1529 aa17.76■□□□□ 0.43
SNCAIP-216ENST00000512146 RPS6KB1P23443 525 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 EIF5P55010 431 aaKnown RBP17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 ZMYM1Q5SVZ6 1142 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 TAF6LQ9Y6J9 622 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 DOT1LQ8TEK3 1739 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 GOLIM4O00461 696 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 CTSWP56202 376 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 BLOC1S2Q6QNY1 142 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 GAS2L3Q86XJ1 694 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 RIPOR2Q9Y4F9 1068 aa17.75■□□□□ 0.43
SNCAIP-216ENST00000512146 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 CHGBP05060 677 aa17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 GPTP24298 496 aa17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 ST3GAL1Q11201 340 aa17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 ME3Q16798 604 aa17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 INTS5Q6P9B9 1019 aaKnown RBP17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 SYNE4Q8N205 404 aa17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 SEC62Q99442 399 aaKnown RBP17.74■□□□□ 0.43
SNCAIP-216ENST00000512146 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 CICQ96RK0 1608 aaPredicted RBP17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 ZNF445P59923 1031 aa17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 AK7Q96M32 723 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms