RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 KCNQ2O43526 872 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 RFX5P48382 616 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 RAB3GAP1Q15042 981 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 NBPF11Q86T75 865 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 FRAT2O75474 233 aaPredicted RBP2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 BMP6P22004 513 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 KCNA4P22459 653 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 C1QTNF8P60827 252 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 IRF5Q13568 498 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 CHADLQ6NUI6 762 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 NLRP13Q86W25 1043 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 OTUD7AQ8TE49 926 aaPredicted RBP2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 BORCS6Q96GS4 357 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 LMBRD1Q9NUN5 540 aa2.21□□□□□ -2.05
TRAPPC13-211ENST00000512009 TSPY4P0CV99 314 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 TSPY10P0CW01 314 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 CLCN1P35523 988 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 LRRN4CLQ8ND94 238 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 XAGE2Q96GT9 111 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 TMEM51Q9NW97 253 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 C10orf142B7Z368 130 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 GIGYF1O75420 1035 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 CHGBP05060 677 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 TRIM28Q13263 835 aaKnown RBP2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 NFKBIBQ15653 356 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 FBXL16Q8N461 479 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 TMEM131Q92545 1883 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 COL6A1P12109 1028 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 ARID5BQ14865 1188 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 ORAI2Q96SN7 254 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZCCHC17Q9NP64 241 aaKnown RBP2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 PPP1R37O75864 691 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 CENPBP07199 599 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 MTX1Q13505 466 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLC35G1Q2M3R5 365 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLC10A5Q5PT55 438 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 CFAP70Q5T0N1 1121 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 ANKLE1Q8NAG6 615 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF784Q8NCA9 323 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 CRBNQ96SW2 442 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 GMLQ99445 158 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 TMX1Q9H3N1 280 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 PALD1Q9ULE6 856 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 TRIP11Q15643 1979 aa2.21□□□□□ -2.06
TRAPPC13-211ENST00000512009 ARID3CA6NKF2 412 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 CCDC142Q17RM4 750 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 FAM237AA0A1B0GTK4 181 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 FBLN1P23142 703 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 FKBP8Q14318 412 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 NENFQ9UMX5 172 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 EID1Q9Y6B2 187 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF500O60304 480 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZRANB2O95218 330 aaKnown RBP eCLIP2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF445P59923 1031 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 NPM2Q86SE8 214 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 RBM42Q9BTD8 480 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 NUCB1Q02818 461 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 USPL1Q5W0Q7 1092 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 FRAT1Q92837 279 aaPredicted RBP2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 PHF8Q9UPP1 1060 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF541Q9H0D2 1346 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 DENND4CQ5VZ89 1909 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 USP24Q9UPU5 2620 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 CHL1O00533 1208 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 SPATA20Q8TB22 786 aa2.2□□□□□ -2.06
TRAPPC13-211ENST00000512009 NOVP48745 357 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 SLC15A2Q16348 729 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 INTS3Q68E01 1043 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 FAM109BQ6ICB4 259 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 KRI1Q8N9T8 703 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 BCL2L12Q9HB09 334 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 STAP2Q9UGK3 403 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 AXIN2Q9Y2T1 843 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 ZNF804BA4D1E1 1349 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 SSFA2P28290 1259 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 NCAPHQ15003 741 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 METTL16Q86W50 562 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 REXO1L1PQ8IX06 675 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 PANK3Q9H999 370 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 WBP1LQ9NX94 342 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 TMEM63CQ9P1W3 806 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 ANKFY1Q9P2R3 1169 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 NOP58Q9Y2X3 529 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 MCM3APO60318 1980 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 NOTCH4Q99466 2003 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 TGFB2P61812 414 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 PDE3AQ14432 1141 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 P3H3Q8IVL6 736 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 SEC31BQ9NQW1 1179 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 PCM1Q15154 2024 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 HCLS1P14317 486 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 ENGASEQ8NFI3 743 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 IP6K1Q92551 441 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 TBC1D30Q9Y2I9 924 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 PDE3BQ13370 1112 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 GRIPAP1Q4V328 841 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 MRPL50Q8N5N7 158 aaKnown RBP2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 GAS2L2Q8NHY3 880 aa2.19□□□□□ -2.06
TRAPPC13-211ENST00000512009 PTPRCP08575 1304 aa2.18□□□□□ -2.06
TRAPPC13-211ENST00000512009 STK36Q9NRP7 1315 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms