RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
HOXA4-203ENST00000511914 ERFEQ4G0M1 354 aa13.09□□□□□ -0.31
HOXA4-203ENST00000511914 TNS4Q8IZW8 715 aa13.09□□□□□ -0.31
HOXA4-203ENST00000511914 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
HOXA4-203ENST00000511914 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.31
HOXA4-203ENST00000511914 A0A087WZG4 1122 aa13.08□□□□□ -0.32
HOXA4-203ENST00000511914 POTECB2RU33 542 aa13.08□□□□□ -0.32
HOXA4-203ENST00000511914 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
HOXA4-203ENST00000511914 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
HOXA4-203ENST00000511914 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
HOXA4-203ENST00000511914 FKBP5Q13451 457 aaPredicted RBP13.08□□□□□ -0.32
HOXA4-203ENST00000511914 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
HOXA4-203ENST00000511914 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
HOXA4-203ENST00000511914 G2E3Q7L622 706 aa13.08□□□□□ -0.32
HOXA4-203ENST00000511914 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
HOXA4-203ENST00000511914 A1BGP04217 495 aa13.07□□□□□ -0.32
HOXA4-203ENST00000511914 PDE6BP35913 854 aa13.07□□□□□ -0.32
HOXA4-203ENST00000511914 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
HOXA4-203ENST00000511914 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
HOXA4-203ENST00000511914 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
HOXA4-203ENST00000511914 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
HOXA4-203ENST00000511914 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
HOXA4-203ENST00000511914 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
HOXA4-203ENST00000511914 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
HOXA4-203ENST00000511914 NPM2Q86SE8 214 aaKnown RBP13.06□□□□□ -0.32
HOXA4-203ENST00000511914 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
HOXA4-203ENST00000511914 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
HOXA4-203ENST00000511914 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
HOXA4-203ENST00000511914 GNAI3P08754 354 aa13.05□□□□□ -0.32
HOXA4-203ENST00000511914 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
HOXA4-203ENST00000511914 PDIA6Q15084 440 aa13.05□□□□□ -0.32
HOXA4-203ENST00000511914 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
HOXA4-203ENST00000511914 TAOK3Q9H2K8 898 aa13.05□□□□□ -0.32
HOXA4-203ENST00000511914 METRNQ9UJH8 293 aa13.05□□□□□ -0.32
HOXA4-203ENST00000511914 HDAC5Q9UQL6 1122 aa13.05□□□□□ -0.32
HOXA4-203ENST00000511914 POTEMA6NI47 508 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 IGHDP01880 384 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 ST5P78524 1137 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
HOXA4-203ENST00000511914 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
HOXA4-203ENST00000511914 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
HOXA4-203ENST00000511914 SCN4AP35499 1836 aa13.04□□□□□ -0.32
HOXA4-203ENST00000511914 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
HOXA4-203ENST00000511914 ALDH1L1O75891 902 aa13.03□□□□□ -0.32
HOXA4-203ENST00000511914 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
HOXA4-203ENST00000511914 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
HOXA4-203ENST00000511914 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
HOXA4-203ENST00000511914 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
HOXA4-203ENST00000511914 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
HOXA4-203ENST00000511914 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 F6X3S4 739 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 SRGNP10124 158 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 SLC4A10Q6U841 1118 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
HOXA4-203ENST00000511914 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 C7P10643 843 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 MASTLQ96GX5 879 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 LTBP3Q9NS15 1303 aa13.01□□□□□ -0.33
HOXA4-203ENST00000511914 GNAI2P04899 355 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 PROSER3Q2NL68 480 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 STYK1Q6J9G0 422 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 POTEGQ6S5H5 508 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 OLFM4Q6UX06 510 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
HOXA4-203ENST00000511914 ANKRD44Q8N8A2 993 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 LINS1Q8NG48 757 aa13□□□□□ -0.33
HOXA4-203ENST00000511914 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
HOXA4-203ENST00000511914 HMMRO75330 724 aa12.99□□□□□ -0.33
HOXA4-203ENST00000511914 MEIS3Q99687 375 aa12.99□□□□□ -0.33
HOXA4-203ENST00000511914 USP44Q9H0E7 712 aa12.99□□□□□ -0.33
HOXA4-203ENST00000511914 ZNF541Q9H0D2 1346 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 NUP98P52948 1817 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 NEXNQ0ZGT2 675 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 CCDC93Q567U6 631 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
HOXA4-203ENST00000511914 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 PLBD2Q8NHP8 589 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
HOXA4-203ENST00000511914 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
HOXA4-203ENST00000511914 ANXA1P04083 346 aa12.97□□□□□ -0.33
HOXA4-203ENST00000511914 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
HOXA4-203ENST00000511914 CEP85Q6P2H3 762 aa12.97□□□□□ -0.33
HOXA4-203ENST00000511914 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
HOXA4-203ENST00000511914 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
HOXA4-203ENST00000511914 METTL22Q9BUU2 404 aaPredicted RBP12.97□□□□□ -0.33
HOXA4-203ENST00000511914 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
HOXA4-203ENST00000511914 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms