RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 PDE8AO60658 829 aa21.5■■□□□ 1.03
SMN2-210ENST00000511812 VEGFAP15692 232 aaPredicted RBP21.5■■□□□ 1.03
SMN2-210ENST00000511812 CWF19L2Q2TBE0 894 aaKnown RBP21.5■■□□□ 1.03
SMN2-210ENST00000511812 SUPT20HQ8NEM7 779 aa21.5■■□□□ 1.03
SMN2-210ENST00000511812 JARID2Q92833 1246 aaPredicted RBP21.5■■□□□ 1.03
SMN2-210ENST00000511812 LAMB2P55268 1798 aa21.5■■□□□ 1.03
SMN2-210ENST00000511812 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
SMN2-210ENST00000511812 CCDC152Q4G0S7 254 aa21.49■■□□□ 1.03
SMN2-210ENST00000511812 DPP8Q6V1X1 898 aaPredicted RBP21.49■■□□□ 1.03
SMN2-210ENST00000511812 MPNDQ8N594 471 aa21.49■■□□□ 1.03
SMN2-210ENST00000511812 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
SMN2-210ENST00000511812 DDX60Q8IY21 1712 aaKnown RBP21.49■■□□□ 1.03
SMN2-210ENST00000511812 SLFN5Q08AF3 891 aa21.48■■□□□ 1.03
SMN2-210ENST00000511812 MIER1Q8N108 512 aa21.48■■□□□ 1.03
SMN2-210ENST00000511812 LARGE2Q8N3Y3 721 aa21.48■■□□□ 1.03
SMN2-210ENST00000511812 SNED1Q8TER0 1413 aa21.47■■□□□ 1.03
SMN2-210ENST00000511812 LINS1Q8NG48 757 aa21.47■■□□□ 1.03
SMN2-210ENST00000511812 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
SMN2-210ENST00000511812 PPIP5K2O43314 1243 aa21.46■■□□□ 1.03
SMN2-210ENST00000511812 DDNO94850 711 aaPredicted RBP21.46■■□□□ 1.03
SMN2-210ENST00000511812 EIF6P56537 245 aaKnown RBP21.46■■□□□ 1.03
SMN2-210ENST00000511812 RPS8P62241 208 aaKnown RBP21.46■■□□□ 1.03
SMN2-210ENST00000511812 RBM46Q8TBY0 533 aaKnown RBP21.46■■□□□ 1.03
SMN2-210ENST00000511812 VPS33BQ9H267 617 aa21.46■■□□□ 1.03
SMN2-210ENST00000511812 GCKRQ14397 625 aa21.45■■□□□ 1.02
SMN2-210ENST00000511812 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
SMN2-210ENST00000511812 SLC51AQ86UW1 340 aa21.45■■□□□ 1.02
SMN2-210ENST00000511812 NIM1KQ8IY84 436 aa21.45■■□□□ 1.02
SMN2-210ENST00000511812 CCDC85AQ96PX6 553 aaPredicted RBP21.45■■□□□ 1.02
SMN2-210ENST00000511812 F6X3S4 739 aa21.44■■□□□ 1.02
SMN2-210ENST00000511812 FZD9O00144 591 aa21.44■■□□□ 1.02
SMN2-210ENST00000511812 CDCA7LQ96GN5 454 aa21.44■■□□□ 1.02
SMN2-210ENST00000511812 RTFDC1Q9BY42 306 aaPredicted RBP21.44■■□□□ 1.02
SMN2-210ENST00000511812 IQCA1LA6NCM1 817 aa21.43■■□□□ 1.02
SMN2-210ENST00000511812 H7C1W4 665 aa21.43■■□□□ 1.02
SMN2-210ENST00000511812 CTSWP56202 376 aa21.43■■□□□ 1.02
SMN2-210ENST00000511812 SEC31BQ9NQW1 1179 aa21.43■■□□□ 1.02
SMN2-210ENST00000511812 NSFL1CQ9UNZ2 370 aaKnown RBP21.43■■□□□ 1.02
SMN2-210ENST00000511812 AOC3Q16853 763 aa21.42■■□□□ 1.02
SMN2-210ENST00000511812 ZNF541Q9H0D2 1346 aa21.42■■□□□ 1.02
SMN2-210ENST00000511812 WDR90Q96KV7 1748 aa21.41■■□□□ 1.02
SMN2-210ENST00000511812 HSPA6P17066 643 aa21.41■■□□□ 1.02
SMN2-210ENST00000511812 SLC4A10Q6U841 1118 aa21.41■■□□□ 1.02
SMN2-210ENST00000511812 ANKRD18AQ8IVF6 992 aa21.41■■□□□ 1.02
SMN2-210ENST00000511812 SMC1BQ8NDV3 1235 aa21.41■■□□□ 1.02
SMN2-210ENST00000511812 CDC5LQ99459 802 aaKnown RBP21.41■■□□□ 1.02
SMN2-210ENST00000511812 TAF1P21675 1872 aa21.41■■□□□ 1.02
SMN2-210ENST00000511812 FSTL1Q12841 308 aa21.4■■□□□ 1.02
SMN2-210ENST00000511812 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
SMN2-210ENST00000511812 GPC2Q8N158 579 aa21.4■■□□□ 1.02
SMN2-210ENST00000511812 TTLL11Q8NHH1 800 aa21.4■■□□□ 1.02
SMN2-210ENST00000511812 L3MBTL3Q96JM7 780 aaPredicted RBP21.4■■□□□ 1.02
SMN2-210ENST00000511812 GJA3Q9Y6H8 435 aa21.4■■□□□ 1.02
SMN2-210ENST00000511812 POTECB2RU33 542 aa21.39■■□□□ 1.01
SMN2-210ENST00000511812 C6orf229H3BNL8 230 aa21.39■■□□□ 1.01
SMN2-210ENST00000511812 KIAA2012Q0VF49 1180 aa21.39■■□□□ 1.01
SMN2-210ENST00000511812 MRPL50Q8N5N7 158 aaKnown RBP21.39■■□□□ 1.01
SMN2-210ENST00000511812 PLA2G12BQ9BX93 195 aa21.39■■□□□ 1.01
SMN2-210ENST00000511812 CT47B1P0C2W7 299 aaPredicted RBP21.38■■□□□ 1.01
SMN2-210ENST00000511812 GPSM2P81274 684 aa21.38■■□□□ 1.01
SMN2-210ENST00000511812 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
SMN2-210ENST00000511812 SSH1Q8WYL5 1049 aa21.38■■□□□ 1.01
SMN2-210ENST00000511812 EYA3Q99504 573 aa21.38■■□□□ 1.01
SMN2-210ENST00000511812 SRCIN1Q9C0H9 1055 aa21.38■■□□□ 1.01
SMN2-210ENST00000511812 ANKIB1Q9P2G1 1089 aa21.38■■□□□ 1.01
SMN2-210ENST00000511812 PTPRCP08575 1304 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 ALDH1L1O75891 902 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 WASHC4Q2M389 1173 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 GREM2Q9H772 168 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
SMN2-210ENST00000511812 HACL1Q9UJ83 578 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 ZNRF3Q9ULT6 936 aa21.37■■□□□ 1.01
SMN2-210ENST00000511812 LMOD1P29536 600 aaPredicted RBP21.36■■□□□ 1.01
SMN2-210ENST00000511812 CASP7P55210 303 aa21.36■■□□□ 1.01
SMN2-210ENST00000511812 BCL2L13Q9BXK5 485 aa21.36■■□□□ 1.01
SMN2-210ENST00000511812 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
SMN2-210ENST00000511812 LRRC37AA6NMS7 1700 aa21.35■■□□□ 1.01
SMN2-210ENST00000511812 IGHMBP2P38935 993 aaKnown RBP21.35■■□□□ 1.01
SMN2-210ENST00000511812 GGA1Q9UJY5 639 aa21.35■■□□□ 1.01
SMN2-210ENST00000511812 RTL9Q8NET4 1388 aa21.35■■□□□ 1.01
SMN2-210ENST00000511812 COL4A5P29400 1685 aa21.34■■□□□ 1.01
SMN2-210ENST00000511812 GRM8O00222 908 aa21.34■■□□□ 1.01
SMN2-210ENST00000511812 RIMBP2O15034 1052 aa21.34■■□□□ 1.01
SMN2-210ENST00000511812 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMN2-210ENST00000511812 TBC1D16Q8TBP0 767 aa21.34■■□□□ 1.01
SMN2-210ENST00000511812 TAF1DQ9H5J8 278 aaPredicted RBP21.34■■□□□ 1.01
SMN2-210ENST00000511812 PODXL2Q9NZ53 605 aa21.34■■□□□ 1.01
SMN2-210ENST00000511812 POLLQ9UGP5 575 aa21.34■■□□□ 1.01
SMN2-210ENST00000511812 MYH3P11055 1940 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 G3V3G9 751 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 UFL1O94874 794 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 ITGA6P23229 1130 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 EPHX2P34913 555 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 APLP1P51693 650 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 EAPPQ56P03 285 aaPredicted RBP21.33■■□□□ 1.01
SMN2-210ENST00000511812 DCAF8Q5TAQ9 597 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 CIAPIN1Q6FI81 312 aa21.33■■□□□ 1.01
SMN2-210ENST00000511812 ZC3H12CQ9C0D7 883 aaKnown RBP21.33■■□□□ 1.01
SMN2-210ENST00000511812 BSDC1Q9NW68 430 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms